Protein–RNA interactions for Protein: Q9NQ94

A1CF, APOBEC1 complementation factor, humanhuman

Known RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A1CFQ9NQ94 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
A1CFQ9NQ94 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
A1CFQ9NQ94 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
A1CFQ9NQ94 AC131212.1-201ENST00000613771 668 ntBASIC27.41■■□□□ 1.98
A1CFQ9NQ94 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
A1CFQ9NQ94 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC27.4■■□□□ 1.98
A1CFQ9NQ94 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
A1CFQ9NQ94 KRT18P24-201ENST00000344739 1156 ntBASIC27.4■■□□□ 1.98
A1CFQ9NQ94 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
A1CFQ9NQ94 AL356441.2-201ENST00000443009 864 ntBASIC27.4■■□□□ 1.98
A1CFQ9NQ94 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
A1CFQ9NQ94 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
A1CFQ9NQ94 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
A1CFQ9NQ94 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
A1CFQ9NQ94 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
A1CFQ9NQ94 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC27.39■■□□□ 1.98
A1CFQ9NQ94 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC27.38■■□□□ 1.97
A1CFQ9NQ94 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.38■■□□□ 1.97
A1CFQ9NQ94 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
A1CFQ9NQ94 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC27.38■■□□□ 1.97
A1CFQ9NQ94 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
A1CFQ9NQ94 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27.38■■□□□ 1.97
A1CFQ9NQ94 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC27.38■■□□□ 1.97
A1CFQ9NQ94 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
A1CFQ9NQ94 AL592295.1-201ENST00000400984 884 ntBASIC27.38■■□□□ 1.97
A1CFQ9NQ94 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
A1CFQ9NQ94 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
A1CFQ9NQ94 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
A1CFQ9NQ94 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
A1CFQ9NQ94 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
A1CFQ9NQ94 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
A1CFQ9NQ94 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
A1CFQ9NQ94 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC27.37■■□□□ 1.97
A1CFQ9NQ94 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
A1CFQ9NQ94 CREM-229ENST00000474362 1030 ntTSL 2 BASIC27.37■■□□□ 1.97
A1CFQ9NQ94 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
A1CFQ9NQ94 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
A1CFQ9NQ94 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
A1CFQ9NQ94 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC27.36■■□□□ 1.97
A1CFQ9NQ94 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC27.36■■□□□ 1.97
A1CFQ9NQ94 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
A1CFQ9NQ94 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
A1CFQ9NQ94 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
A1CFQ9NQ94 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC27.35■■□□□ 1.97
A1CFQ9NQ94 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
A1CFQ9NQ94 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
A1CFQ9NQ94 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
A1CFQ9NQ94 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC27.35■■□□□ 1.97
A1CFQ9NQ94 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC27.35■■□□□ 1.97
A1CFQ9NQ94 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
A1CFQ9NQ94 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
A1CFQ9NQ94 AC120024.1-201ENST00000562672 995 ntBASIC27.34■■□□□ 1.97
A1CFQ9NQ94 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
A1CFQ9NQ94 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC27.33■■□□□ 1.97
A1CFQ9NQ94 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
A1CFQ9NQ94 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC27.33■■□□□ 1.97
A1CFQ9NQ94 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
A1CFQ9NQ94 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
A1CFQ9NQ94 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC27.32■■□□□ 1.96
A1CFQ9NQ94 AC135731.1-201ENST00000569415 2548 ntBASIC27.32■■□□□ 1.96
A1CFQ9NQ94 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC27.32■■□□□ 1.96
A1CFQ9NQ94 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC27.32■■□□□ 1.96
A1CFQ9NQ94 BX664725.1-201ENST00000438252 379 ntBASIC27.32■■□□□ 1.96
A1CFQ9NQ94 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
A1CFQ9NQ94 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC27.32■■□□□ 1.96
A1CFQ9NQ94 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC27.32■■□□□ 1.96
A1CFQ9NQ94 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
A1CFQ9NQ94 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC27.31■■□□□ 1.96
A1CFQ9NQ94 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC27.31■■□□□ 1.96
A1CFQ9NQ94 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
A1CFQ9NQ94 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
A1CFQ9NQ94 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
A1CFQ9NQ94 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
A1CFQ9NQ94 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
A1CFQ9NQ94 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
A1CFQ9NQ94 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC27.3■■□□□ 1.96
A1CFQ9NQ94 KRT125P-201ENST00000546827 989 ntBASIC27.3■■□□□ 1.96
A1CFQ9NQ94 MIR4787-201ENST00000607364 84 ntBASIC27.3■■□□□ 1.96
A1CFQ9NQ94 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC27.3■■□□□ 1.96
A1CFQ9NQ94 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC27.29■■□□□ 1.96
A1CFQ9NQ94 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
A1CFQ9NQ94 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC27.29■■□□□ 1.96
A1CFQ9NQ94 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
A1CFQ9NQ94 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC27.29■■□□□ 1.96
A1CFQ9NQ94 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
A1CFQ9NQ94 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
A1CFQ9NQ94 SNAI3-AS1-204ENST00000567997 2048 ntBASIC27.28■■□□□ 1.96
A1CFQ9NQ94 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC27.28■■□□□ 1.96
A1CFQ9NQ94 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
A1CFQ9NQ94 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC27.28■■□□□ 1.96
A1CFQ9NQ94 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
A1CFQ9NQ94 AC137630.3-201ENST00000607245 391 ntBASIC27.28■■□□□ 1.96
A1CFQ9NQ94 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC27.28■■□□□ 1.96
A1CFQ9NQ94 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
A1CFQ9NQ94 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC27.27■■□□□ 1.96
A1CFQ9NQ94 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC27.27■■□□□ 1.96
A1CFQ9NQ94 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
A1CFQ9NQ94 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
A1CFQ9NQ94 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
A1CFQ9NQ94 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms