Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
ATP6V0A4Q9HBG4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.62■■□□□ 1.85
ATP6V0A4Q9HBG4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
ATP6V0A4Q9HBG4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.61■■□□□ 1.85
ATP6V0A4Q9HBG4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.61■■□□□ 1.85
ATP6V0A4Q9HBG4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.61■■□□□ 1.85
ATP6V0A4Q9HBG4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.61■■□□□ 1.85
ATP6V0A4Q9HBG4 PVT1_1.1-201ENST00000615125 194 ntBASIC26.61■■□□□ 1.85
ATP6V0A4Q9HBG4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ATP6V0A4Q9HBG4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ATP6V0A4Q9HBG4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
ATP6V0A4Q9HBG4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
ATP6V0A4Q9HBG4 AC103834.1-201ENST00000520383 144 ntBASIC26.6■■□□□ 1.85
ATP6V0A4Q9HBG4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.6■■□□□ 1.85
ATP6V0A4Q9HBG4 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ATP6V0A4Q9HBG4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.59■■□□□ 1.85
ATP6V0A4Q9HBG4 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ATP6V0A4Q9HBG4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
ATP6V0A4Q9HBG4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.58■■□□□ 1.85
ATP6V0A4Q9HBG4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.58■■□□□ 1.85
ATP6V0A4Q9HBG4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
ATP6V0A4Q9HBG4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC26.58■■□□□ 1.85
ATP6V0A4Q9HBG4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
ATP6V0A4Q9HBG4 ERN1-208ENST00000606895 2068 ntBASIC26.58■■□□□ 1.84
ATP6V0A4Q9HBG4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.57■■□□□ 1.84
ATP6V0A4Q9HBG4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ATP6V0A4Q9HBG4 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.57■■□□□ 1.84
ATP6V0A4Q9HBG4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ATP6V0A4Q9HBG4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ATP6V0A4Q9HBG4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
ATP6V0A4Q9HBG4 AC092803.2-201ENST00000564287 1899 ntBASIC26.56■■□□□ 1.84
ATP6V0A4Q9HBG4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ATP6V0A4Q9HBG4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.56■■□□□ 1.84
ATP6V0A4Q9HBG4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.56■■□□□ 1.84
ATP6V0A4Q9HBG4 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
ATP6V0A4Q9HBG4 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ATP6V0A4Q9HBG4 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ATP6V0A4Q9HBG4 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ATP6V0A4Q9HBG4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ATP6V0A4Q9HBG4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
ATP6V0A4Q9HBG4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.54■■□□□ 1.84
ATP6V0A4Q9HBG4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ATP6V0A4Q9HBG4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ATP6V0A4Q9HBG4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.54■■□□□ 1.84
ATP6V0A4Q9HBG4 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.54■■□□□ 1.84
ATP6V0A4Q9HBG4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
ATP6V0A4Q9HBG4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
ATP6V0A4Q9HBG4 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
ATP6V0A4Q9HBG4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.53■■□□□ 1.84
ATP6V0A4Q9HBG4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
ATP6V0A4Q9HBG4 MIR4508-201ENST00000584178 70 ntBASIC26.53■■□□□ 1.84
ATP6V0A4Q9HBG4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ATP6V0A4Q9HBG4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ATP6V0A4Q9HBG4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.53■■□□□ 1.84
ATP6V0A4Q9HBG4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.53■■□□□ 1.84
ATP6V0A4Q9HBG4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ATP6V0A4Q9HBG4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.52■■□□□ 1.84
ATP6V0A4Q9HBG4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ATP6V0A4Q9HBG4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ATP6V0A4Q9HBG4 LONRF2P2-201ENST00000439212 571 ntBASIC26.52■■□□□ 1.84
ATP6V0A4Q9HBG4 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
ATP6V0A4Q9HBG4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.52■■□□□ 1.84
ATP6V0A4Q9HBG4 AC009299.2-201ENST00000482477 511 ntBASIC26.52■■□□□ 1.84
ATP6V0A4Q9HBG4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
ATP6V0A4Q9HBG4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.52■■□□□ 1.84
ATP6V0A4Q9HBG4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
ATP6V0A4Q9HBG4 AC010501.1-201ENST00000606270 1962 ntBASIC26.51■■□□□ 1.83
ATP6V0A4Q9HBG4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.51■■□□□ 1.83
ATP6V0A4Q9HBG4 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.51■■□□□ 1.83
ATP6V0A4Q9HBG4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
ATP6V0A4Q9HBG4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
ATP6V0A4Q9HBG4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
ATP6V0A4Q9HBG4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ATP6V0A4Q9HBG4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.51■■□□□ 1.83
ATP6V0A4Q9HBG4 AC019171.1-201ENST00000601251 1056 ntBASIC26.51■■□□□ 1.83
ATP6V0A4Q9HBG4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
ATP6V0A4Q9HBG4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ATP6V0A4Q9HBG4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC26.5■■□□□ 1.83
ATP6V0A4Q9HBG4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ATP6V0A4Q9HBG4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ATP6V0A4Q9HBG4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
ATP6V0A4Q9HBG4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ATP6V0A4Q9HBG4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
ATP6V0A4Q9HBG4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ATP6V0A4Q9HBG4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
ATP6V0A4Q9HBG4 AC096887.2-201ENST00000623443 1957 ntBASIC26.49■■□□□ 1.83
ATP6V0A4Q9HBG4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
ATP6V0A4Q9HBG4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
ATP6V0A4Q9HBG4 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.49■■□□□ 1.83
ATP6V0A4Q9HBG4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
ATP6V0A4Q9HBG4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
ATP6V0A4Q9HBG4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.49■■□□□ 1.83
ATP6V0A4Q9HBG4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
ATP6V0A4Q9HBG4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
ATP6V0A4Q9HBG4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
ATP6V0A4Q9HBG4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
ATP6V0A4Q9HBG4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
ATP6V0A4Q9HBG4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
ATP6V0A4Q9HBG4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ATP6V0A4Q9HBG4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms