Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 AC141586.4-201ENST00000624558 1573 ntBASIC20.12■□□□□ 0.81
ALX4Q9H161 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.11■□□□□ 0.81
ALX4Q9H161 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.11■□□□□ 0.81
ALX4Q9H161 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.11■□□□□ 0.81
ALX4Q9H161 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ALX4Q9H161 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.11■□□□□ 0.81
ALX4Q9H161 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ALX4Q9H161 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ALX4Q9H161 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ALX4Q9H161 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.1■□□□□ 0.81
ALX4Q9H161 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ALX4Q9H161 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ALX4Q9H161 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.09■□□□□ 0.81
ALX4Q9H161 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALX4Q9H161 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALX4Q9H161 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALX4Q9H161 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALX4Q9H161 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ALX4Q9H161 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ALX4Q9H161 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ALX4Q9H161 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ALX4Q9H161 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.08■□□□□ 0.81
ALX4Q9H161 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ALX4Q9H161 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ALX4Q9H161 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.08■□□□□ 0.81
ALX4Q9H161 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ALX4Q9H161 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALX4Q9H161 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALX4Q9H161 CLDN5-201ENST00000403084 2357 ntBASIC20.07■□□□□ 0.8
ALX4Q9H161 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALX4Q9H161 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ALX4Q9H161 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.07■□□□□ 0.8
ALX4Q9H161 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.07■□□□□ 0.8
ALX4Q9H161 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALX4Q9H161 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ALX4Q9H161 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.07■□□□□ 0.8
ALX4Q9H161 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.07■□□□□ 0.8
ALX4Q9H161 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALX4Q9H161 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ALX4Q9H161 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ALX4Q9H161 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ALX4Q9H161 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ALX4Q9H161 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.05■□□□□ 0.8
ALX4Q9H161 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.05■□□□□ 0.8
ALX4Q9H161 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ALX4Q9H161 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALX4Q9H161 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALX4Q9H161 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALX4Q9H161 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALX4Q9H161 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ALX4Q9H161 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.05■□□□□ 0.8
ALX4Q9H161 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.04■□□□□ 0.8
ALX4Q9H161 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.04■□□□□ 0.8
ALX4Q9H161 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ALX4Q9H161 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALX4Q9H161 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ALX4Q9H161 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ALX4Q9H161 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ALX4Q9H161 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.03■□□□□ 0.8
ALX4Q9H161 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.03■□□□□ 0.8
ALX4Q9H161 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
ALX4Q9H161 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALX4Q9H161 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALX4Q9H161 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.02■□□□□ 0.8
ALX4Q9H161 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.02■□□□□ 0.8
ALX4Q9H161 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.02■□□□□ 0.8
ALX4Q9H161 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALX4Q9H161 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALX4Q9H161 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ALX4Q9H161 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ALX4Q9H161 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.02■□□□□ 0.79
ALX4Q9H161 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
ALX4Q9H161 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALX4Q9H161 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ALX4Q9H161 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALX4Q9H161 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ALX4Q9H161 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ALX4Q9H161 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ALX4Q9H161 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ALX4Q9H161 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ALX4Q9H161 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ALX4Q9H161 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20■□□□□ 0.79
ALX4Q9H161 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20■□□□□ 0.79
ALX4Q9H161 LINC01971-201ENST00000617888 1048 ntBASIC20■□□□□ 0.79
ALX4Q9H161 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ALX4Q9H161 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20■□□□□ 0.79
ALX4Q9H161 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20■□□□□ 0.79
ALX4Q9H161 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ALX4Q9H161 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
ALX4Q9H161 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ALX4Q9H161 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ALX4Q9H161 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ALX4Q9H161 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ALX4Q9H161 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ALX4Q9H161 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ALX4Q9H161 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ALX4Q9H161 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.99■□□□□ 0.79
ALX4Q9H161 AC110285.7-201ENST00000624417 1536 ntBASIC19.99■□□□□ 0.79
ALX4Q9H161 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.99■□□□□ 0.79
ALX4Q9H161 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms