Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 AC097639.1-201ENST00000565519 1891 ntBASIC20.95■□□□□ 0.94
COMMD4Q9H0A8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COMMD4Q9H0A8 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COMMD4Q9H0A8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COMMD4Q9H0A8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COMMD4Q9H0A8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
COMMD4Q9H0A8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.94■□□□□ 0.94
COMMD4Q9H0A8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
COMMD4Q9H0A8 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.94■□□□□ 0.94
COMMD4Q9H0A8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COMMD4Q9H0A8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.94■□□□□ 0.94
COMMD4Q9H0A8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
COMMD4Q9H0A8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COMMD4Q9H0A8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
COMMD4Q9H0A8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COMMD4Q9H0A8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.93■□□□□ 0.94
COMMD4Q9H0A8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
COMMD4Q9H0A8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COMMD4Q9H0A8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COMMD4Q9H0A8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.93■□□□□ 0.94
COMMD4Q9H0A8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COMMD4Q9H0A8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COMMD4Q9H0A8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COMMD4Q9H0A8 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.92■□□□□ 0.94
COMMD4Q9H0A8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COMMD4Q9H0A8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COMMD4Q9H0A8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COMMD4Q9H0A8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
COMMD4Q9H0A8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.92■□□□□ 0.94
COMMD4Q9H0A8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COMMD4Q9H0A8 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
COMMD4Q9H0A8 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COMMD4Q9H0A8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COMMD4Q9H0A8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COMMD4Q9H0A8 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COMMD4Q9H0A8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COMMD4Q9H0A8 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COMMD4Q9H0A8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COMMD4Q9H0A8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COMMD4Q9H0A8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
COMMD4Q9H0A8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.91■□□□□ 0.94
COMMD4Q9H0A8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COMMD4Q9H0A8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
COMMD4Q9H0A8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COMMD4Q9H0A8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COMMD4Q9H0A8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
COMMD4Q9H0A8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.9■□□□□ 0.94
COMMD4Q9H0A8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COMMD4Q9H0A8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
COMMD4Q9H0A8 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.9■□□□□ 0.94
COMMD4Q9H0A8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.9■□□□□ 0.94
COMMD4Q9H0A8 ZNRF2P2-203ENST00000454624 420 ntBASIC20.9■□□□□ 0.94
COMMD4Q9H0A8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
COMMD4Q9H0A8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COMMD4Q9H0A8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.9■□□□□ 0.94
COMMD4Q9H0A8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COMMD4Q9H0A8 LINC01124-201ENST00000409786 2117 ntBASIC20.9■□□□□ 0.94
COMMD4Q9H0A8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COMMD4Q9H0A8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
COMMD4Q9H0A8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
COMMD4Q9H0A8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.89■□□□□ 0.93
COMMD4Q9H0A8 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COMMD4Q9H0A8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COMMD4Q9H0A8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COMMD4Q9H0A8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COMMD4Q9H0A8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COMMD4Q9H0A8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COMMD4Q9H0A8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
COMMD4Q9H0A8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
COMMD4Q9H0A8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD4Q9H0A8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD4Q9H0A8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD4Q9H0A8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
COMMD4Q9H0A8 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.88■□□□□ 0.93
COMMD4Q9H0A8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD4Q9H0A8 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.88■□□□□ 0.93
COMMD4Q9H0A8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD4Q9H0A8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD4Q9H0A8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD4Q9H0A8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
COMMD4Q9H0A8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD4Q9H0A8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD4Q9H0A8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COMMD4Q9H0A8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD4Q9H0A8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.87■□□□□ 0.93
COMMD4Q9H0A8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COMMD4Q9H0A8 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
COMMD4Q9H0A8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
COMMD4Q9H0A8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD4Q9H0A8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.86■□□□□ 0.93
COMMD4Q9H0A8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD4Q9H0A8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD4Q9H0A8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD4Q9H0A8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD4Q9H0A8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COMMD4Q9H0A8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
COMMD4Q9H0A8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
COMMD4Q9H0A8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COMMD4Q9H0A8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COMMD4Q9H0A8 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms