Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KRTAP4-1Q9BYQ7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC12.63□□□□□ -0.39
KRTAP4-1Q9BYQ7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC12.63□□□□□ -0.39
KRTAP4-1Q9BYQ7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC12.63□□□□□ -0.39
KRTAP4-1Q9BYQ7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
KRTAP4-1Q9BYQ7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC12.63□□□□□ -0.39
KRTAP4-1Q9BYQ7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC12.63□□□□□ -0.39
KRTAP4-1Q9BYQ7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC12.63□□□□□ -0.39
KRTAP4-1Q9BYQ7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KRTAP4-1Q9BYQ7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP4-1Q9BYQ7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC12.62□□□□□ -0.39
KRTAP4-1Q9BYQ7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
KRTAP4-1Q9BYQ7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP4-1Q9BYQ7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP4-1Q9BYQ7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP4-1Q9BYQ7 NALT1-201ENST00000429224 738 ntTSL 5 BASIC12.62□□□□□ -0.39
KRTAP4-1Q9BYQ7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC12.62□□□□□ -0.39
KRTAP4-1Q9BYQ7 AC092028.1-203ENST00000608262 953 ntBASIC12.62□□□□□ -0.39
KRTAP4-1Q9BYQ7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC12.62□□□□□ -0.39
KRTAP4-1Q9BYQ7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
KRTAP4-1Q9BYQ7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
KRTAP4-1Q9BYQ7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC12.62□□□□□ -0.39
KRTAP4-1Q9BYQ7 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
KRTAP4-1Q9BYQ7 LINC01003-201ENST00000564834 1764 ntBASIC12.61□□□□□ -0.39
KRTAP4-1Q9BYQ7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC12.61□□□□□ -0.39
KRTAP4-1Q9BYQ7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC12.61□□□□□ -0.39
KRTAP4-1Q9BYQ7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KRTAP4-1Q9BYQ7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KRTAP4-1Q9BYQ7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KRTAP4-1Q9BYQ7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
KRTAP4-1Q9BYQ7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC12.61□□□□□ -0.39
KRTAP4-1Q9BYQ7 AL139246.5-201ENST00000606645 996 ntBASIC12.61□□□□□ -0.39
KRTAP4-1Q9BYQ7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KRTAP4-1Q9BYQ7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
KRTAP4-1Q9BYQ7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KRTAP4-1Q9BYQ7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
KRTAP4-1Q9BYQ7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
KRTAP4-1Q9BYQ7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
KRTAP4-1Q9BYQ7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC12.6□□□□□ -0.39
KRTAP4-1Q9BYQ7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC12.6□□□□□ -0.39
KRTAP4-1Q9BYQ7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC12.6□□□□□ -0.39
KRTAP4-1Q9BYQ7 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KRTAP4-1Q9BYQ7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
KRTAP4-1Q9BYQ7 SRR-208ENST00000576848 588 ntTSL 4 BASIC12.6□□□□□ -0.39
KRTAP4-1Q9BYQ7 MIR4281-201ENST00000580852 62 ntBASIC12.6□□□□□ -0.39
KRTAP4-1Q9BYQ7 AC110285.6-201ENST00000617652 491 ntBASIC12.6□□□□□ -0.39
KRTAP4-1Q9BYQ7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC12.59□□□□□ -0.39
KRTAP4-1Q9BYQ7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
KRTAP4-1Q9BYQ7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
KRTAP4-1Q9BYQ7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
KRTAP4-1Q9BYQ7 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KRTAP4-1Q9BYQ7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC12.59□□□□□ -0.39
KRTAP4-1Q9BYQ7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC12.59□□□□□ -0.39
KRTAP4-1Q9BYQ7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC12.59□□□□□ -0.39
KRTAP4-1Q9BYQ7 AL117332.1-201ENST00000622628 974 ntBASIC12.59□□□□□ -0.39
KRTAP4-1Q9BYQ7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC12.59□□□□□ -0.39
KRTAP4-1Q9BYQ7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KRTAP4-1Q9BYQ7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
KRTAP4-1Q9BYQ7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
KRTAP4-1Q9BYQ7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
KRTAP4-1Q9BYQ7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
KRTAP4-1Q9BYQ7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
KRTAP4-1Q9BYQ7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KRTAP4-1Q9BYQ7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
KRTAP4-1Q9BYQ7 AL136116.3-201ENST00000402907 1138 ntBASIC12.58□□□□□ -0.4
KRTAP4-1Q9BYQ7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
KRTAP4-1Q9BYQ7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC12.58□□□□□ -0.4
KRTAP4-1Q9BYQ7 MIR4466-201ENST00000606121 54 ntBASIC12.58□□□□□ -0.4
KRTAP4-1Q9BYQ7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
KRTAP4-1Q9BYQ7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
KRTAP4-1Q9BYQ7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
KRTAP4-1Q9BYQ7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KRTAP4-1Q9BYQ7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KRTAP4-1Q9BYQ7 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
KRTAP4-1Q9BYQ7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC12.57□□□□□ -0.4
KRTAP4-1Q9BYQ7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC12.57□□□□□ -0.4
KRTAP4-1Q9BYQ7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KRTAP4-1Q9BYQ7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC12.57□□□□□ -0.4
KRTAP4-1Q9BYQ7 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KRTAP4-1Q9BYQ7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC12.56□□□□□ -0.4
KRTAP4-1Q9BYQ7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC12.56□□□□□ -0.4
KRTAP4-1Q9BYQ7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC12.56□□□□□ -0.4
KRTAP4-1Q9BYQ7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC12.56□□□□□ -0.4
KRTAP4-1Q9BYQ7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
KRTAP4-1Q9BYQ7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC12.56□□□□□ -0.4
KRTAP4-1Q9BYQ7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
KRTAP4-1Q9BYQ7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
KRTAP4-1Q9BYQ7 AC142472.1-201ENST00000612013 1741 ntBASIC12.56□□□□□ -0.4
KRTAP4-1Q9BYQ7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
KRTAP4-1Q9BYQ7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
KRTAP4-1Q9BYQ7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
KRTAP4-1Q9BYQ7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
KRTAP4-1Q9BYQ7 KRT18P10-201ENST00000388836 1287 ntBASIC12.55□□□□□ -0.4
KRTAP4-1Q9BYQ7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC12.55□□□□□ -0.4
KRTAP4-1Q9BYQ7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
KRTAP4-1Q9BYQ7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC12.55□□□□□ -0.4
KRTAP4-1Q9BYQ7 MIR3621-201ENST00000580529 85 ntBASIC12.55□□□□□ -0.4
KRTAP4-1Q9BYQ7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
KRTAP4-1Q9BYQ7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
KRTAP4-1Q9BYQ7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms