Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GFI1Q99684 AL359258.2-201ENST00000564063 1566 ntBASIC20.68■□□□□ 0.9
GFI1Q99684 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
GFI1Q99684 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GFI1Q99684 AC012676.1-201ENST00000574705 1949 ntBASIC20.67■□□□□ 0.9
GFI1Q99684 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GFI1Q99684 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
GFI1Q99684 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GFI1Q99684 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GFI1Q99684 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GFI1Q99684 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GFI1Q99684 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GFI1Q99684 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GFI1Q99684 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.66■□□□□ 0.9
GFI1Q99684 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GFI1Q99684 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GFI1Q99684 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.66■□□□□ 0.9
GFI1Q99684 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GFI1Q99684 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GFI1Q99684 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
GFI1Q99684 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.66■□□□□ 0.9
GFI1Q99684 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GFI1Q99684 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GFI1Q99684 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GFI1Q99684 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GFI1Q99684 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
GFI1Q99684 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
GFI1Q99684 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GFI1Q99684 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GFI1Q99684 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.65■□□□□ 0.9
GFI1Q99684 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GFI1Q99684 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
GFI1Q99684 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GFI1Q99684 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GFI1Q99684 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
GFI1Q99684 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
GFI1Q99684 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
GFI1Q99684 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GFI1Q99684 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GFI1Q99684 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GFI1Q99684 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
GFI1Q99684 AC008813.1-201ENST00000536597 885 ntBASIC20.63■□□□□ 0.89
GFI1Q99684 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GFI1Q99684 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GFI1Q99684 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GFI1Q99684 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.62■□□□□ 0.89
GFI1Q99684 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
GFI1Q99684 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GFI1Q99684 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GFI1Q99684 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GFI1Q99684 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
GFI1Q99684 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.62■□□□□ 0.89
GFI1Q99684 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GFI1Q99684 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GFI1Q99684 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
GFI1Q99684 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GFI1Q99684 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GFI1Q99684 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GFI1Q99684 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
GFI1Q99684 DUX4L13-201ENST00000554103 1267 ntBASIC20.61■□□□□ 0.89
GFI1Q99684 DUX4L15-201ENST00000611059 1267 ntBASIC20.61■□□□□ 0.89
GFI1Q99684 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.61■□□□□ 0.89
GFI1Q99684 DUX4L23-201ENST00000615195 1269 ntBASIC20.61■□□□□ 0.89
GFI1Q99684 DUX4L24-201ENST00000617576 1269 ntBASIC20.61■□□□□ 0.89
GFI1Q99684 DUX4L22-201ENST00000618238 1269 ntBASIC20.61■□□□□ 0.89
GFI1Q99684 DUX4L20-201ENST00000619712 1269 ntBASIC20.61■□□□□ 0.89
GFI1Q99684 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GFI1Q99684 DUX4L21-201ENST00000622058 1269 ntBASIC20.61■□□□□ 0.89
GFI1Q99684 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.61■□□□□ 0.89
GFI1Q99684 DUX4L10-201ENST00000622460 1267 ntBASIC20.61■□□□□ 0.89
GFI1Q99684 DUX4L25-201ENST00000624915 1269 ntBASIC20.61■□□□□ 0.89
GFI1Q99684 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GFI1Q99684 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
GFI1Q99684 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GFI1Q99684 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GFI1Q99684 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GFI1Q99684 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.6■□□□□ 0.89
GFI1Q99684 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GFI1Q99684 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GFI1Q99684 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.6■□□□□ 0.89
GFI1Q99684 LINC01971-201ENST00000617888 1048 ntBASIC20.6■□□□□ 0.89
GFI1Q99684 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GFI1Q99684 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
GFI1Q99684 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GFI1Q99684 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
GFI1Q99684 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
GFI1Q99684 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.59■□□□□ 0.89
GFI1Q99684 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GFI1Q99684 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GFI1Q99684 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GFI1Q99684 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GFI1Q99684 HLA-V-202ENST00000446817 847 ntBASIC20.59■□□□□ 0.89
GFI1Q99684 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.59■□□□□ 0.89
GFI1Q99684 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GFI1Q99684 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.59■□□□□ 0.89
GFI1Q99684 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
GFI1Q99684 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.59■□□□□ 0.89
GFI1Q99684 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GFI1Q99684 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GFI1Q99684 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms