Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
LYSMD1Q96S90 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LYSMD1Q96S90 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
LYSMD1Q96S90 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.92■■□□□ 1.42
LYSMD1Q96S90 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
LYSMD1Q96S90 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
LYSMD1Q96S90 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LYSMD1Q96S90 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
LYSMD1Q96S90 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LYSMD1Q96S90 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.91■■□□□ 1.42
LYSMD1Q96S90 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
LYSMD1Q96S90 AC097639.1-201ENST00000565519 1891 ntBASIC23.91■■□□□ 1.42
LYSMD1Q96S90 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.9■■□□□ 1.42
LYSMD1Q96S90 AC074183.2-201ENST00000623112 922 ntBASIC23.9■■□□□ 1.42
LYSMD1Q96S90 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.9■■□□□ 1.42
LYSMD1Q96S90 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.9■■□□□ 1.42
LYSMD1Q96S90 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LYSMD1Q96S90 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
LYSMD1Q96S90 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.89■■□□□ 1.41
LYSMD1Q96S90 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
LYSMD1Q96S90 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.41
LYSMD1Q96S90 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
LYSMD1Q96S90 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LYSMD1Q96S90 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LYSMD1Q96S90 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
LYSMD1Q96S90 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.88■■□□□ 1.41
LYSMD1Q96S90 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.88■■□□□ 1.41
LYSMD1Q96S90 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
LYSMD1Q96S90 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
LYSMD1Q96S90 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
LYSMD1Q96S90 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.87■■□□□ 1.41
LYSMD1Q96S90 LONRF2P2-201ENST00000439212 571 ntBASIC23.87■■□□□ 1.41
LYSMD1Q96S90 AC019171.1-201ENST00000601251 1056 ntBASIC23.87■■□□□ 1.41
LYSMD1Q96S90 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.87■■□□□ 1.41
LYSMD1Q96S90 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.87■■□□□ 1.41
LYSMD1Q96S90 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
LYSMD1Q96S90 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
LYSMD1Q96S90 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
LYSMD1Q96S90 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LYSMD1Q96S90 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LYSMD1Q96S90 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.86■■□□□ 1.41
LYSMD1Q96S90 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
LYSMD1Q96S90 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
LYSMD1Q96S90 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LYSMD1Q96S90 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
LYSMD1Q96S90 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
LYSMD1Q96S90 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.86■■□□□ 1.41
LYSMD1Q96S90 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.86■■□□□ 1.41
LYSMD1Q96S90 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
LYSMD1Q96S90 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
LYSMD1Q96S90 AC139795.1-202ENST00000500444 432 ntBASIC23.85■■□□□ 1.41
LYSMD1Q96S90 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.84■■□□□ 1.41
LYSMD1Q96S90 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
LYSMD1Q96S90 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LYSMD1Q96S90 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LYSMD1Q96S90 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
LYSMD1Q96S90 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LYSMD1Q96S90 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
LYSMD1Q96S90 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.84■■□□□ 1.41
LYSMD1Q96S90 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.84■■□□□ 1.41
LYSMD1Q96S90 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.84■■□□□ 1.41
LYSMD1Q96S90 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.84■■□□□ 1.41
LYSMD1Q96S90 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
LYSMD1Q96S90 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
LYSMD1Q96S90 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
LYSMD1Q96S90 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
LYSMD1Q96S90 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
LYSMD1Q96S90 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
LYSMD1Q96S90 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.83■■□□□ 1.41
LYSMD1Q96S90 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.83■■□□□ 1.41
LYSMD1Q96S90 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.83■■□□□ 1.41
LYSMD1Q96S90 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
LYSMD1Q96S90 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
LYSMD1Q96S90 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LYSMD1Q96S90 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LYSMD1Q96S90 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LYSMD1Q96S90 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.82■■□□□ 1.4
LYSMD1Q96S90 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
LYSMD1Q96S90 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LYSMD1Q96S90 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
LYSMD1Q96S90 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LYSMD1Q96S90 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
LYSMD1Q96S90 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.81■■□□□ 1.4
LYSMD1Q96S90 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LYSMD1Q96S90 BHLHE23-202ENST00000612929 1109 ntBASIC23.81■■□□□ 1.4
LYSMD1Q96S90 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.81■■□□□ 1.4
LYSMD1Q96S90 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LYSMD1Q96S90 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
LYSMD1Q96S90 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.8■■□□□ 1.4
LYSMD1Q96S90 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LYSMD1Q96S90 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LYSMD1Q96S90 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LYSMD1Q96S90 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LYSMD1Q96S90 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LYSMD1Q96S90 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LYSMD1Q96S90 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LYSMD1Q96S90 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
LYSMD1Q96S90 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LYSMD1Q96S90 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LYSMD1Q96S90 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms