Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H2AAQ96QV6 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H2AAQ96QV6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H2AAQ96QV6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
HIST1H2AAQ96QV6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
HIST1H2AAQ96QV6 AC020928.2-201ENST00000588717 2197 ntBASIC20.56■□□□□ 0.88
HIST1H2AAQ96QV6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H2AAQ96QV6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H2AAQ96QV6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HIST1H2AAQ96QV6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H2AAQ96QV6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H2AAQ96QV6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H2AAQ96QV6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HIST1H2AAQ96QV6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
HIST1H2AAQ96QV6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HIST1H2AAQ96QV6 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
HIST1H2AAQ96QV6 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.54■□□□□ 0.88
HIST1H2AAQ96QV6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HIST1H2AAQ96QV6 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.54■□□□□ 0.88
HIST1H2AAQ96QV6 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.54■□□□□ 0.88
HIST1H2AAQ96QV6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H2AAQ96QV6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
HIST1H2AAQ96QV6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HIST1H2AAQ96QV6 AC096887.2-201ENST00000623443 1957 ntBASIC20.54■□□□□ 0.88
HIST1H2AAQ96QV6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HIST1H2AAQ96QV6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
HIST1H2AAQ96QV6 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST1H2AAQ96QV6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST1H2AAQ96QV6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
HIST1H2AAQ96QV6 AC093536.1-201ENST00000569153 554 ntBASIC20.53■□□□□ 0.88
HIST1H2AAQ96QV6 AC007029.1-201ENST00000604183 313 ntBASIC20.53■□□□□ 0.88
HIST1H2AAQ96QV6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
HIST1H2AAQ96QV6 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HIST1H2AAQ96QV6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HIST1H2AAQ96QV6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.52■□□□□ 0.88
HIST1H2AAQ96QV6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HIST1H2AAQ96QV6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HIST1H2AAQ96QV6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HIST1H2AAQ96QV6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HIST1H2AAQ96QV6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HIST1H2AAQ96QV6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HIST1H2AAQ96QV6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.52■□□□□ 0.88
HIST1H2AAQ96QV6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
HIST1H2AAQ96QV6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC20.52■□□□□ 0.87
HIST1H2AAQ96QV6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.51■□□□□ 0.87
HIST1H2AAQ96QV6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST1H2AAQ96QV6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
HIST1H2AAQ96QV6 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST1H2AAQ96QV6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HIST1H2AAQ96QV6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
HIST1H2AAQ96QV6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST1H2AAQ96QV6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST1H2AAQ96QV6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HIST1H2AAQ96QV6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
HIST1H2AAQ96QV6 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.5■□□□□ 0.87
HIST1H2AAQ96QV6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.5■□□□□ 0.87
HIST1H2AAQ96QV6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST1H2AAQ96QV6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HIST1H2AAQ96QV6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST1H2AAQ96QV6 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HIST1H2AAQ96QV6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIST1H2AAQ96QV6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIST1H2AAQ96QV6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.49■□□□□ 0.87
HIST1H2AAQ96QV6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.49■□□□□ 0.87
HIST1H2AAQ96QV6 AC097639.1-201ENST00000565519 1891 ntBASIC20.48■□□□□ 0.87
HIST1H2AAQ96QV6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HIST1H2AAQ96QV6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.48■□□□□ 0.87
HIST1H2AAQ96QV6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.48■□□□□ 0.87
HIST1H2AAQ96QV6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.48■□□□□ 0.87
HIST1H2AAQ96QV6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIST1H2AAQ96QV6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
HIST1H2AAQ96QV6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
HIST1H2AAQ96QV6 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.47■□□□□ 0.87
HIST1H2AAQ96QV6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST1H2AAQ96QV6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
HIST1H2AAQ96QV6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST1H2AAQ96QV6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST1H2AAQ96QV6 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST1H2AAQ96QV6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST1H2AAQ96QV6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HIST1H2AAQ96QV6 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST1H2AAQ96QV6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HIST1H2AAQ96QV6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HIST1H2AAQ96QV6 RNF126P1-201ENST00000567452 1320 ntBASIC20.47■□□□□ 0.87
HIST1H2AAQ96QV6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST1H2AAQ96QV6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST1H2AAQ96QV6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HIST1H2AAQ96QV6 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
HIST1H2AAQ96QV6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.46■□□□□ 0.87
HIST1H2AAQ96QV6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.46■□□□□ 0.87
HIST1H2AAQ96QV6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST1H2AAQ96QV6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
HIST1H2AAQ96QV6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.46■□□□□ 0.87
HIST1H2AAQ96QV6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
HIST1H2AAQ96QV6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST1H2AAQ96QV6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST1H2AAQ96QV6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HIST1H2AAQ96QV6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.45■□□□□ 0.86
HIST1H2AAQ96QV6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST1H2AAQ96QV6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms