Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.07■■□□□ 1.6
NECTIN4Q96NY8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
NECTIN4Q96NY8 AC110285.6-201ENST00000617652 491 ntBASIC25.06■■□□□ 1.6
NECTIN4Q96NY8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
NECTIN4Q96NY8 AL449106.1-201ENST00000608517 1980 ntBASIC25.05■■□□□ 1.6
NECTIN4Q96NY8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NECTIN4Q96NY8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
NECTIN4Q96NY8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
NECTIN4Q96NY8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.05■■□□□ 1.6
NECTIN4Q96NY8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
NECTIN4Q96NY8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
NECTIN4Q96NY8 AC005837.3-201ENST00000612163 286 ntBASIC25.05■■□□□ 1.6
NECTIN4Q96NY8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
NECTIN4Q96NY8 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
NECTIN4Q96NY8 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
NECTIN4Q96NY8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
NECTIN4Q96NY8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
NECTIN4Q96NY8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
NECTIN4Q96NY8 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.04■■□□□ 1.6
NECTIN4Q96NY8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.04■■□□□ 1.6
NECTIN4Q96NY8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
NECTIN4Q96NY8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NECTIN4Q96NY8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
NECTIN4Q96NY8 AC133561.4-201ENST00000566112 224 ntBASIC25.03■■□□□ 1.6
NECTIN4Q96NY8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC25.03■■□□□ 1.6
NECTIN4Q96NY8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.03■■□□□ 1.6
NECTIN4Q96NY8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
NECTIN4Q96NY8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
NECTIN4Q96NY8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.02■■□□□ 1.6
NECTIN4Q96NY8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.02■■□□□ 1.6
NECTIN4Q96NY8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
NECTIN4Q96NY8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NECTIN4Q96NY8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
NECTIN4Q96NY8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
NECTIN4Q96NY8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC25.01■■□□□ 1.59
NECTIN4Q96NY8 AC096631.2-201ENST00000436136 790 ntBASIC25.01■■□□□ 1.59
NECTIN4Q96NY8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.01■■□□□ 1.59
NECTIN4Q96NY8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.01■■□□□ 1.59
NECTIN4Q96NY8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC25■■□□□ 1.59
NECTIN4Q96NY8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25■■□□□ 1.59
NECTIN4Q96NY8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC25■■□□□ 1.59
NECTIN4Q96NY8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC25■■□□□ 1.59
NECTIN4Q96NY8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25■■□□□ 1.59
NECTIN4Q96NY8 AC011551.1-201ENST00000614101 683 ntBASIC25■■□□□ 1.59
NECTIN4Q96NY8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25■■□□□ 1.59
NECTIN4Q96NY8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
NECTIN4Q96NY8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
NECTIN4Q96NY8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
NECTIN4Q96NY8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.99■■□□□ 1.59
NECTIN4Q96NY8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
NECTIN4Q96NY8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
NECTIN4Q96NY8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.99■■□□□ 1.59
NECTIN4Q96NY8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24.99■■□□□ 1.59
NECTIN4Q96NY8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.99■■□□□ 1.59
NECTIN4Q96NY8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.99■■□□□ 1.59
NECTIN4Q96NY8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.99■■□□□ 1.59
NECTIN4Q96NY8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NECTIN4Q96NY8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NECTIN4Q96NY8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.98■■□□□ 1.59
NECTIN4Q96NY8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.98■■□□□ 1.59
NECTIN4Q96NY8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC24.98■■□□□ 1.59
NECTIN4Q96NY8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.98■■□□□ 1.59
NECTIN4Q96NY8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.98■■□□□ 1.59
NECTIN4Q96NY8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
NECTIN4Q96NY8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NECTIN4Q96NY8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
NECTIN4Q96NY8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
NECTIN4Q96NY8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.97■■□□□ 1.59
NECTIN4Q96NY8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
NECTIN4Q96NY8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
NECTIN4Q96NY8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
NECTIN4Q96NY8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC24.96■■□□□ 1.59
NECTIN4Q96NY8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
NECTIN4Q96NY8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
NECTIN4Q96NY8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.95■■□□□ 1.58
NECTIN4Q96NY8 BX255925.1-201ENST00000566954 1854 ntBASIC24.95■■□□□ 1.58
NECTIN4Q96NY8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
NECTIN4Q96NY8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NECTIN4Q96NY8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.94■■□□□ 1.58
NECTIN4Q96NY8 MIR4466-201ENST00000606121 54 ntBASIC24.94■■□□□ 1.58
NECTIN4Q96NY8 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.94■■□□□ 1.58
NECTIN4Q96NY8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NECTIN4Q96NY8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.93■■□□□ 1.58
NECTIN4Q96NY8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
NECTIN4Q96NY8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.93■■□□□ 1.58
NECTIN4Q96NY8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.93■■□□□ 1.58
NECTIN4Q96NY8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
NECTIN4Q96NY8 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.93■■□□□ 1.58
NECTIN4Q96NY8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
NECTIN4Q96NY8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.93■■□□□ 1.58
NECTIN4Q96NY8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
NECTIN4Q96NY8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NECTIN4Q96NY8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.92■■□□□ 1.58
NECTIN4Q96NY8 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.92■■□□□ 1.58
NECTIN4Q96NY8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
NECTIN4Q96NY8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NECTIN4Q96NY8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
NECTIN4Q96NY8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NECTIN4Q96NY8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
NECTIN4Q96NY8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms