Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.85■■□□□ 1.41
CFAP54Q96N23 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CFAP54Q96N23 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CFAP54Q96N23 EDA-201ENST00000338901 1233 ntBASIC23.85■■□□□ 1.41
CFAP54Q96N23 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.85■■□□□ 1.41
CFAP54Q96N23 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CFAP54Q96N23 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
CFAP54Q96N23 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
CFAP54Q96N23 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CFAP54Q96N23 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
CFAP54Q96N23 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.84■■□□□ 1.41
CFAP54Q96N23 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CFAP54Q96N23 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CFAP54Q96N23 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CFAP54Q96N23 IKBKGP1-201ENST00000612193 1073 ntBASIC23.83■■□□□ 1.41
CFAP54Q96N23 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.83■■□□□ 1.41
CFAP54Q96N23 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CFAP54Q96N23 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CFAP54Q96N23 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CFAP54Q96N23 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CFAP54Q96N23 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
CFAP54Q96N23 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.82■■□□□ 1.4
CFAP54Q96N23 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.82■■□□□ 1.4
CFAP54Q96N23 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CFAP54Q96N23 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.81■■□□□ 1.4
CFAP54Q96N23 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CFAP54Q96N23 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CFAP54Q96N23 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.81■■□□□ 1.4
CFAP54Q96N23 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CFAP54Q96N23 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.81■■□□□ 1.4
CFAP54Q96N23 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CFAP54Q96N23 AL359504.2-201ENST00000605506 1601 ntBASIC23.8■■□□□ 1.4
CFAP54Q96N23 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CFAP54Q96N23 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.8■■□□□ 1.4
CFAP54Q96N23 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CFAP54Q96N23 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CFAP54Q96N23 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CFAP54Q96N23 UNC93B3-201ENST00000308076 687 ntBASIC23.8■■□□□ 1.4
CFAP54Q96N23 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CFAP54Q96N23 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CFAP54Q96N23 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CFAP54Q96N23 AC024257.2-201ENST00000549699 147 ntBASIC23.79■■□□□ 1.4
CFAP54Q96N23 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CFAP54Q96N23 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CFAP54Q96N23 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CFAP54Q96N23 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CFAP54Q96N23 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFAP54Q96N23 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CFAP54Q96N23 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.78■■□□□ 1.4
CFAP54Q96N23 AC022517.1-201ENST00000592429 346 ntBASIC23.78■■□□□ 1.4
CFAP54Q96N23 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFAP54Q96N23 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFAP54Q96N23 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.78■■□□□ 1.4
CFAP54Q96N23 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFAP54Q96N23 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CFAP54Q96N23 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.78■■□□□ 1.4
CFAP54Q96N23 MIR939-201ENST00000401314 82 ntBASIC23.78■■□□□ 1.4
CFAP54Q96N23 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CFAP54Q96N23 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CFAP54Q96N23 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.77■■□□□ 1.4
CFAP54Q96N23 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.77■■□□□ 1.4
CFAP54Q96N23 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.77■■□□□ 1.4
CFAP54Q96N23 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CFAP54Q96N23 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CFAP54Q96N23 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.76■■□□□ 1.39
CFAP54Q96N23 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CFAP54Q96N23 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CFAP54Q96N23 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
CFAP54Q96N23 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.75■■□□□ 1.39
CFAP54Q96N23 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CFAP54Q96N23 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CFAP54Q96N23 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.75■■□□□ 1.39
CFAP54Q96N23 AP001330.3-201ENST00000520123 633 ntBASIC23.75■■□□□ 1.39
CFAP54Q96N23 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CFAP54Q96N23 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CFAP54Q96N23 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC23.74■■□□□ 1.39
CFAP54Q96N23 AL139393.2-201ENST00000608721 2025 ntBASIC23.74■■□□□ 1.39
CFAP54Q96N23 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CFAP54Q96N23 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.74■■□□□ 1.39
CFAP54Q96N23 AC092437.1-201ENST00000624794 1048 ntBASIC23.73■■□□□ 1.39
CFAP54Q96N23 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CFAP54Q96N23 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CFAP54Q96N23 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.73■■□□□ 1.39
CFAP54Q96N23 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.73■■□□□ 1.39
CFAP54Q96N23 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CFAP54Q96N23 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CFAP54Q96N23 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.72■■□□□ 1.39
CFAP54Q96N23 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CFAP54Q96N23 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.72■■□□□ 1.39
CFAP54Q96N23 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.72■■□□□ 1.39
CFAP54Q96N23 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CFAP54Q96N23 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.71■■□□□ 1.39
CFAP54Q96N23 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.71■■□□□ 1.39
CFAP54Q96N23 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.71■■□□□ 1.39
CFAP54Q96N23 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CFAP54Q96N23 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.71■■□□□ 1.39
CFAP54Q96N23 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CFAP54Q96N23 ABHD17AP1-201ENST00000358206 933 ntBASIC23.7■■□□□ 1.38
CFAP54Q96N23 AC120024.1-201ENST00000562672 995 ntBASIC23.7■■□□□ 1.38
CFAP54Q96N23 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms