Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC01560Q8TB33 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.87■□□□□ 0.93
LINC01560Q8TB33 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.87■□□□□ 0.93
LINC01560Q8TB33 AC120024.1-201ENST00000562672 995 ntBASIC20.87■□□□□ 0.93
LINC01560Q8TB33 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
LINC01560Q8TB33 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LINC01560Q8TB33 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC01560Q8TB33 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC01560Q8TB33 AC008406.3-201ENST00000620001 1374 ntBASIC20.86■□□□□ 0.93
LINC01560Q8TB33 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC01560Q8TB33 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.86■□□□□ 0.93
LINC01560Q8TB33 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC01560Q8TB33 UNC93B8-201ENST00000511903 705 ntBASIC20.86■□□□□ 0.93
LINC01560Q8TB33 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.86■□□□□ 0.93
LINC01560Q8TB33 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.86■□□□□ 0.93
LINC01560Q8TB33 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.86■□□□□ 0.93
LINC01560Q8TB33 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC01560Q8TB33 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.85■□□□□ 0.93
LINC01560Q8TB33 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC01560Q8TB33 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.85■□□□□ 0.93
LINC01560Q8TB33 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC01560Q8TB33 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
LINC01560Q8TB33 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
LINC01560Q8TB33 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC01560Q8TB33 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.84■□□□□ 0.93
LINC01560Q8TB33 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.84■□□□□ 0.93
LINC01560Q8TB33 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC01560Q8TB33 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.84■□□□□ 0.93
LINC01560Q8TB33 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.84■□□□□ 0.93
LINC01560Q8TB33 TSPY9P-201ENST00000440215 945 ntBASIC20.84■□□□□ 0.93
LINC01560Q8TB33 TSPY11P-201ENST00000442607 1045 ntBASIC20.84■□□□□ 0.93
LINC01560Q8TB33 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.84■□□□□ 0.93
LINC01560Q8TB33 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.84■□□□□ 0.93
LINC01560Q8TB33 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC01560Q8TB33 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC01560Q8TB33 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LINC01560Q8TB33 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LINC01560Q8TB33 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LINC01560Q8TB33 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
LINC01560Q8TB33 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LINC01560Q8TB33 KRT16P3-201ENST00000439127 1283 ntBASIC20.83■□□□□ 0.93
LINC01560Q8TB33 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.83■□□□□ 0.93
LINC01560Q8TB33 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
LINC01560Q8TB33 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LINC01560Q8TB33 AC137630.3-201ENST00000607245 391 ntBASIC20.82■□□□□ 0.92
LINC01560Q8TB33 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LINC01560Q8TB33 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.82■□□□□ 0.92
LINC01560Q8TB33 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC01560Q8TB33 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC01560Q8TB33 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.82■□□□□ 0.92
LINC01560Q8TB33 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC01560Q8TB33 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC01560Q8TB33 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC01560Q8TB33 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.81■□□□□ 0.92
LINC01560Q8TB33 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC01560Q8TB33 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC01560Q8TB33 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LINC01560Q8TB33 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LINC01560Q8TB33 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LINC01560Q8TB33 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.8■□□□□ 0.92
LINC01560Q8TB33 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.8■□□□□ 0.92
LINC01560Q8TB33 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC01560Q8TB33 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC01560Q8TB33 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
LINC01560Q8TB33 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.79■□□□□ 0.92
LINC01560Q8TB33 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
LINC01560Q8TB33 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.79■□□□□ 0.92
LINC01560Q8TB33 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.78■□□□□ 0.92
LINC01560Q8TB33 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
LINC01560Q8TB33 AC021242.3-201ENST00000607598 1377 ntBASIC20.78■□□□□ 0.92
LINC01560Q8TB33 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LINC01560Q8TB33 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC01560Q8TB33 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.78■□□□□ 0.92
LINC01560Q8TB33 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.78■□□□□ 0.92
LINC01560Q8TB33 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LINC01560Q8TB33 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
LINC01560Q8TB33 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC01560Q8TB33 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC01560Q8TB33 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.77■□□□□ 0.92
LINC01560Q8TB33 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.77■□□□□ 0.92
LINC01560Q8TB33 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC01560Q8TB33 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC01560Q8TB33 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC01560Q8TB33 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.76■□□□□ 0.91
LINC01560Q8TB33 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.76■□□□□ 0.91
LINC01560Q8TB33 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.76■□□□□ 0.91
LINC01560Q8TB33 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LINC01560Q8TB33 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC01560Q8TB33 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC01560Q8TB33 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINC01560Q8TB33 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LINC01560Q8TB33 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.75■□□□□ 0.91
LINC01560Q8TB33 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
LINC01560Q8TB33 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.75■□□□□ 0.91
LINC01560Q8TB33 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.75■□□□□ 0.91
LINC01560Q8TB33 AC142086.6-201ENST00000621154 1765 ntBASIC20.74■□□□□ 0.91
LINC01560Q8TB33 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LINC01560Q8TB33 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
LINC01560Q8TB33 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINC01560Q8TB33 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms