Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SNIP1Q8TAD8 RARRES2P6-201ENST00000567333 442 ntBASIC22.69■■□□□ 1.22
SNIP1Q8TAD8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
SNIP1Q8TAD8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.68■■□□□ 1.22
SNIP1Q8TAD8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SNIP1Q8TAD8 MIR4281-201ENST00000580852 62 ntBASIC22.68■■□□□ 1.22
SNIP1Q8TAD8 MTDHP2-201ENST00000601468 714 ntBASIC22.68■■□□□ 1.22
SNIP1Q8TAD8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
SNIP1Q8TAD8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SNIP1Q8TAD8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SNIP1Q8TAD8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SNIP1Q8TAD8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.67■■□□□ 1.22
SNIP1Q8TAD8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.67■■□□□ 1.22
SNIP1Q8TAD8 MIR4466-201ENST00000606121 54 ntBASIC22.67■■□□□ 1.22
SNIP1Q8TAD8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
SNIP1Q8TAD8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SNIP1Q8TAD8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SNIP1Q8TAD8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.66■■□□□ 1.22
SNIP1Q8TAD8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
SNIP1Q8TAD8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SNIP1Q8TAD8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.66■■□□□ 1.22
SNIP1Q8TAD8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.66■■□□□ 1.22
SNIP1Q8TAD8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SNIP1Q8TAD8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SNIP1Q8TAD8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
SNIP1Q8TAD8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.65■■□□□ 1.22
SNIP1Q8TAD8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.64■■□□□ 1.21
SNIP1Q8TAD8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.64■■□□□ 1.21
SNIP1Q8TAD8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.64■■□□□ 1.21
SNIP1Q8TAD8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.64■■□□□ 1.21
SNIP1Q8TAD8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
SNIP1Q8TAD8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SNIP1Q8TAD8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SNIP1Q8TAD8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SNIP1Q8TAD8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SNIP1Q8TAD8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.63■■□□□ 1.21
SNIP1Q8TAD8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
SNIP1Q8TAD8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SNIP1Q8TAD8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.62■■□□□ 1.21
SNIP1Q8TAD8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SNIP1Q8TAD8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.62■■□□□ 1.21
SNIP1Q8TAD8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
SNIP1Q8TAD8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SNIP1Q8TAD8 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SNIP1Q8TAD8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SNIP1Q8TAD8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SNIP1Q8TAD8 ZNRF2P3-201ENST00000424200 374 ntBASIC22.61■■□□□ 1.21
SNIP1Q8TAD8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SNIP1Q8TAD8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
SNIP1Q8TAD8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
SNIP1Q8TAD8 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.61■■□□□ 1.21
SNIP1Q8TAD8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.61■■□□□ 1.21
SNIP1Q8TAD8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
SNIP1Q8TAD8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.6■■□□□ 1.21
SNIP1Q8TAD8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SNIP1Q8TAD8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SNIP1Q8TAD8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.6■■□□□ 1.21
SNIP1Q8TAD8 AL512631.2-201ENST00000604634 923 ntBASIC22.6■■□□□ 1.21
SNIP1Q8TAD8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SNIP1Q8TAD8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.6■■□□□ 1.21
SNIP1Q8TAD8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNIP1Q8TAD8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNIP1Q8TAD8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNIP1Q8TAD8 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.59■■□□□ 1.21
SNIP1Q8TAD8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNIP1Q8TAD8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
SNIP1Q8TAD8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SNIP1Q8TAD8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.58■■□□□ 1.21
SNIP1Q8TAD8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SNIP1Q8TAD8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SNIP1Q8TAD8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.58■■□□□ 1.21
SNIP1Q8TAD8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.58■■□□□ 1.21
SNIP1Q8TAD8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
SNIP1Q8TAD8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SNIP1Q8TAD8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SNIP1Q8TAD8 AC026271.2-201ENST00000428091 497 ntBASIC22.57■■□□□ 1.2
SNIP1Q8TAD8 AC104564.3-201ENST00000582367 638 ntBASIC22.57■■□□□ 1.2
SNIP1Q8TAD8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SNIP1Q8TAD8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SNIP1Q8TAD8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SNIP1Q8TAD8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SNIP1Q8TAD8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
SNIP1Q8TAD8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
SNIP1Q8TAD8 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SNIP1Q8TAD8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.56■■□□□ 1.2
SNIP1Q8TAD8 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.56■■□□□ 1.2
SNIP1Q8TAD8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.56■■□□□ 1.2
SNIP1Q8TAD8 AC106739.1-201ENST00000617035 715 ntBASIC22.56■■□□□ 1.2
SNIP1Q8TAD8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SNIP1Q8TAD8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC22.56■■□□□ 1.2
SNIP1Q8TAD8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.56■■□□□ 1.2
SNIP1Q8TAD8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
SNIP1Q8TAD8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.55■■□□□ 1.2
SNIP1Q8TAD8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SNIP1Q8TAD8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.55■■□□□ 1.2
SNIP1Q8TAD8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.55■■□□□ 1.2
SNIP1Q8TAD8 AC142381.2-201ENST00000566120 298 ntBASIC22.55■■□□□ 1.2
SNIP1Q8TAD8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.55■■□□□ 1.2
SNIP1Q8TAD8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SNIP1Q8TAD8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms