Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF439Q8NDP4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ZNF439Q8NDP4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF439Q8NDP4 AC007029.1-201ENST00000604183 313 ntBASIC19.67■□□□□ 0.74
ZNF439Q8NDP4 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF439Q8NDP4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF439Q8NDP4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
ZNF439Q8NDP4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.66■□□□□ 0.74
ZNF439Q8NDP4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF439Q8NDP4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF439Q8NDP4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ZNF439Q8NDP4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF439Q8NDP4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.65■□□□□ 0.74
ZNF439Q8NDP4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.65■□□□□ 0.74
ZNF439Q8NDP4 AC093536.1-201ENST00000569153 554 ntBASIC19.65■□□□□ 0.74
ZNF439Q8NDP4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF439Q8NDP4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ZNF439Q8NDP4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
ZNF439Q8NDP4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF439Q8NDP4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF439Q8NDP4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.64■□□□□ 0.73
ZNF439Q8NDP4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZNF439Q8NDP4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ZNF439Q8NDP4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF439Q8NDP4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF439Q8NDP4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF439Q8NDP4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ZNF439Q8NDP4 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF439Q8NDP4 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.63■□□□□ 0.73
ZNF439Q8NDP4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF439Q8NDP4 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.63■□□□□ 0.73
ZNF439Q8NDP4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
ZNF439Q8NDP4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.63■□□□□ 0.73
ZNF439Q8NDP4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.63■□□□□ 0.73
ZNF439Q8NDP4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF439Q8NDP4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZNF439Q8NDP4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF439Q8NDP4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF439Q8NDP4 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.62■□□□□ 0.73
ZNF439Q8NDP4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.62■□□□□ 0.73
ZNF439Q8NDP4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.62■□□□□ 0.73
ZNF439Q8NDP4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF439Q8NDP4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZNF439Q8NDP4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.61■□□□□ 0.73
ZNF439Q8NDP4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF439Q8NDP4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.61■□□□□ 0.73
ZNF439Q8NDP4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF439Q8NDP4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZNF439Q8NDP4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF439Q8NDP4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF439Q8NDP4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.6■□□□□ 0.73
ZNF439Q8NDP4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF439Q8NDP4 RAP2CP1-202ENST00000605179 643 ntBASIC19.6■□□□□ 0.73
ZNF439Q8NDP4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF439Q8NDP4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF439Q8NDP4 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ZNF439Q8NDP4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF439Q8NDP4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF439Q8NDP4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZNF439Q8NDP4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.59■□□□□ 0.73
ZNF439Q8NDP4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF439Q8NDP4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF439Q8NDP4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ZNF439Q8NDP4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF439Q8NDP4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF439Q8NDP4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ZNF439Q8NDP4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZNF439Q8NDP4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF439Q8NDP4 AC097639.1-201ENST00000565519 1891 ntBASIC19.58■□□□□ 0.73
ZNF439Q8NDP4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
ZNF439Q8NDP4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZNF439Q8NDP4 RNF126P1-201ENST00000567452 1320 ntBASIC19.58■□□□□ 0.73
ZNF439Q8NDP4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.58■□□□□ 0.73
ZNF439Q8NDP4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
ZNF439Q8NDP4 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF439Q8NDP4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF439Q8NDP4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.58■□□□□ 0.72
ZNF439Q8NDP4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF439Q8NDP4 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.58■□□□□ 0.72
ZNF439Q8NDP4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
ZNF439Q8NDP4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF439Q8NDP4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.57■□□□□ 0.72
ZNF439Q8NDP4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.57■□□□□ 0.72
ZNF439Q8NDP4 AC026202.3-201ENST00000600805 1127 ntBASIC19.57■□□□□ 0.72
ZNF439Q8NDP4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF439Q8NDP4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
ZNF439Q8NDP4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF439Q8NDP4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF439Q8NDP4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.56■□□□□ 0.72
ZNF439Q8NDP4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF439Q8NDP4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF439Q8NDP4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF439Q8NDP4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF439Q8NDP4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNF439Q8NDP4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
ZNF439Q8NDP4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF439Q8NDP4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF439Q8NDP4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF439Q8NDP4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.55■□□□□ 0.72
ZNF439Q8NDP4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms