Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.15■■□□□ 1.62
SMRP1Q8NCR6 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMRP1Q8NCR6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMRP1Q8NCR6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMRP1Q8NCR6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.14■■□□□ 1.61
SMRP1Q8NCR6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC25.14■■□□□ 1.61
SMRP1Q8NCR6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SMRP1Q8NCR6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.13■■□□□ 1.61
SMRP1Q8NCR6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SMRP1Q8NCR6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.13■■□□□ 1.61
SMRP1Q8NCR6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SMRP1Q8NCR6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.13■■□□□ 1.61
SMRP1Q8NCR6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.13■■□□□ 1.61
SMRP1Q8NCR6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.13■■□□□ 1.61
SMRP1Q8NCR6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SMRP1Q8NCR6 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMRP1Q8NCR6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.12■■□□□ 1.61
SMRP1Q8NCR6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.12■■□□□ 1.61
SMRP1Q8NCR6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.12■■□□□ 1.61
SMRP1Q8NCR6 AL512631.2-201ENST00000604634 923 ntBASIC25.12■■□□□ 1.61
SMRP1Q8NCR6 AL449106.1-201ENST00000608517 1980 ntBASIC25.11■■□□□ 1.61
SMRP1Q8NCR6 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.11■■□□□ 1.61
SMRP1Q8NCR6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.11■■□□□ 1.61
SMRP1Q8NCR6 RARRES2P6-201ENST00000567333 442 ntBASIC25.11■■□□□ 1.61
SMRP1Q8NCR6 AC092666.2-201ENST00000613287 246 ntBASIC25.11■■□□□ 1.61
SMRP1Q8NCR6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.11■■□□□ 1.61
SMRP1Q8NCR6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMRP1Q8NCR6 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SMRP1Q8NCR6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.1■■□□□ 1.61
SMRP1Q8NCR6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SMRP1Q8NCR6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SMRP1Q8NCR6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.1■■□□□ 1.61
SMRP1Q8NCR6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.1■■□□□ 1.61
SMRP1Q8NCR6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.1■■□□□ 1.61
SMRP1Q8NCR6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SMRP1Q8NCR6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SMRP1Q8NCR6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMRP1Q8NCR6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.09■■□□□ 1.61
SMRP1Q8NCR6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.09■■□□□ 1.61
SMRP1Q8NCR6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.09■■□□□ 1.61
SMRP1Q8NCR6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
SMRP1Q8NCR6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
SMRP1Q8NCR6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SMRP1Q8NCR6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SMRP1Q8NCR6 ZNRF2P3-201ENST00000424200 374 ntBASIC25.08■■□□□ 1.61
SMRP1Q8NCR6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.08■■□□□ 1.6
SMRP1Q8NCR6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.07■■□□□ 1.6
SMRP1Q8NCR6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMRP1Q8NCR6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.07■■□□□ 1.6
SMRP1Q8NCR6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.07■■□□□ 1.6
SMRP1Q8NCR6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.07■■□□□ 1.6
SMRP1Q8NCR6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.07■■□□□ 1.6
SMRP1Q8NCR6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SMRP1Q8NCR6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SMRP1Q8NCR6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SMRP1Q8NCR6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMRP1Q8NCR6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMRP1Q8NCR6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
SMRP1Q8NCR6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SMRP1Q8NCR6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.05■■□□□ 1.6
SMRP1Q8NCR6 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.05■■□□□ 1.6
SMRP1Q8NCR6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SMRP1Q8NCR6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
SMRP1Q8NCR6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMRP1Q8NCR6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SMRP1Q8NCR6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SMRP1Q8NCR6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.04■■□□□ 1.6
SMRP1Q8NCR6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SMRP1Q8NCR6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.04■■□□□ 1.6
SMRP1Q8NCR6 AC011551.1-201ENST00000614101 683 ntBASIC25.04■■□□□ 1.6
SMRP1Q8NCR6 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SMRP1Q8NCR6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMRP1Q8NCR6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.03■■□□□ 1.6
SMRP1Q8NCR6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.03■■□□□ 1.6
SMRP1Q8NCR6 AC106739.1-201ENST00000617035 715 ntBASIC25.03■■□□□ 1.6
SMRP1Q8NCR6 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SMRP1Q8NCR6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.02■■□□□ 1.6
SMRP1Q8NCR6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SMRP1Q8NCR6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
SMRP1Q8NCR6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.02■■□□□ 1.6
SMRP1Q8NCR6 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC25.02■■□□□ 1.6
SMRP1Q8NCR6 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SMRP1Q8NCR6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SMRP1Q8NCR6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SMRP1Q8NCR6 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SMRP1Q8NCR6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SMRP1Q8NCR6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.01■■□□□ 1.59
SMRP1Q8NCR6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.01■■□□□ 1.59
SMRP1Q8NCR6 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.01■■□□□ 1.59
SMRP1Q8NCR6 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.01■■□□□ 1.59
SMRP1Q8NCR6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.01■■□□□ 1.59
SMRP1Q8NCR6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SMRP1Q8NCR6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
SMRP1Q8NCR6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
SMRP1Q8NCR6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
SMRP1Q8NCR6 AC026271.2-201ENST00000428091 497 ntBASIC25■■□□□ 1.59
SMRP1Q8NCR6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25■■□□□ 1.59
SMRP1Q8NCR6 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SMRP1Q8NCR6 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SMRP1Q8NCR6 BX255925.1-201ENST00000566954 1854 ntBASIC25■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms