Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
EFCAB3Q8N7B9 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
EFCAB3Q8N7B9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.42■■□□□ 1.34
EFCAB3Q8N7B9 AC126177.7-201ENST00000547904 679 ntBASIC23.42■■□□□ 1.34
EFCAB3Q8N7B9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
EFCAB3Q8N7B9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.42■■□□□ 1.34
EFCAB3Q8N7B9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
EFCAB3Q8N7B9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
EFCAB3Q8N7B9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
EFCAB3Q8N7B9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
EFCAB3Q8N7B9 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.41■■□□□ 1.34
EFCAB3Q8N7B9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
EFCAB3Q8N7B9 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.41■■□□□ 1.34
EFCAB3Q8N7B9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
EFCAB3Q8N7B9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
EFCAB3Q8N7B9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
EFCAB3Q8N7B9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
EFCAB3Q8N7B9 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.4■■□□□ 1.34
EFCAB3Q8N7B9 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.4■■□□□ 1.34
EFCAB3Q8N7B9 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
EFCAB3Q8N7B9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
EFCAB3Q8N7B9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
EFCAB3Q8N7B9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.34
EFCAB3Q8N7B9 U85056.1-201ENST00000616429 682 ntBASIC23.39■■□□□ 1.33
EFCAB3Q8N7B9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
EFCAB3Q8N7B9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.33
EFCAB3Q8N7B9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.39■■□□□ 1.33
EFCAB3Q8N7B9 AC138932.3-201ENST00000567634 1902 ntBASIC23.39■■□□□ 1.33
EFCAB3Q8N7B9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
EFCAB3Q8N7B9 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
EFCAB3Q8N7B9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.38■■□□□ 1.33
EFCAB3Q8N7B9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.38■■□□□ 1.33
EFCAB3Q8N7B9 TSPY13P-201ENST00000338964 914 ntBASIC23.38■■□□□ 1.33
EFCAB3Q8N7B9 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
EFCAB3Q8N7B9 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.38■■□□□ 1.33
EFCAB3Q8N7B9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
EFCAB3Q8N7B9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
EFCAB3Q8N7B9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
EFCAB3Q8N7B9 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.38■■□□□ 1.33
EFCAB3Q8N7B9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.38■■□□□ 1.33
EFCAB3Q8N7B9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
EFCAB3Q8N7B9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.38■■□□□ 1.33
EFCAB3Q8N7B9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
EFCAB3Q8N7B9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
EFCAB3Q8N7B9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.37■■□□□ 1.33
EFCAB3Q8N7B9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.37■■□□□ 1.33
EFCAB3Q8N7B9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
EFCAB3Q8N7B9 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
EFCAB3Q8N7B9 AC142381.3-201ENST00000568208 1670 ntBASIC23.37■■□□□ 1.33
EFCAB3Q8N7B9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.37■■□□□ 1.33
EFCAB3Q8N7B9 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.37■■□□□ 1.33
EFCAB3Q8N7B9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
EFCAB3Q8N7B9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
EFCAB3Q8N7B9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.36■■□□□ 1.33
EFCAB3Q8N7B9 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.36■■□□□ 1.33
EFCAB3Q8N7B9 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
EFCAB3Q8N7B9 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.36■■□□□ 1.33
EFCAB3Q8N7B9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
EFCAB3Q8N7B9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.36■■□□□ 1.33
EFCAB3Q8N7B9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
EFCAB3Q8N7B9 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
EFCAB3Q8N7B9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
EFCAB3Q8N7B9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
EFCAB3Q8N7B9 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
EFCAB3Q8N7B9 AL139125.2-201ENST00000623134 1869 ntBASIC23.35■■□□□ 1.33
EFCAB3Q8N7B9 AC133561.1-201ENST00000568600 2415 ntBASIC23.35■■□□□ 1.33
EFCAB3Q8N7B9 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
EFCAB3Q8N7B9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
EFCAB3Q8N7B9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.34■■□□□ 1.33
EFCAB3Q8N7B9 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
EFCAB3Q8N7B9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
EFCAB3Q8N7B9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
EFCAB3Q8N7B9 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC23.34■■□□□ 1.33
EFCAB3Q8N7B9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
EFCAB3Q8N7B9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
EFCAB3Q8N7B9 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
EFCAB3Q8N7B9 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
EFCAB3Q8N7B9 AC010501.1-201ENST00000606270 1962 ntBASIC23.34■■□□□ 1.33
EFCAB3Q8N7B9 AC022211.4-201ENST00000625094 2161 ntBASIC23.34■■□□□ 1.33
EFCAB3Q8N7B9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
EFCAB3Q8N7B9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
EFCAB3Q8N7B9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
EFCAB3Q8N7B9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
EFCAB3Q8N7B9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
EFCAB3Q8N7B9 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
EFCAB3Q8N7B9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
EFCAB3Q8N7B9 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
EFCAB3Q8N7B9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
EFCAB3Q8N7B9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
EFCAB3Q8N7B9 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.31■■□□□ 1.32
EFCAB3Q8N7B9 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
EFCAB3Q8N7B9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
EFCAB3Q8N7B9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
EFCAB3Q8N7B9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.31■■□□□ 1.32
EFCAB3Q8N7B9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
EFCAB3Q8N7B9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.3■■□□□ 1.32
EFCAB3Q8N7B9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
EFCAB3Q8N7B9 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
EFCAB3Q8N7B9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
EFCAB3Q8N7B9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms