Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
C11orf42Q8N5U0 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
C11orf42Q8N5U0 AC010501.1-201ENST00000606270 1962 ntBASIC19.74■□□□□ 0.75
C11orf42Q8N5U0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf42Q8N5U0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf42Q8N5U0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf42Q8N5U0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf42Q8N5U0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.74■□□□□ 0.75
C11orf42Q8N5U0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
C11orf42Q8N5U0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.74■□□□□ 0.75
C11orf42Q8N5U0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.74■□□□□ 0.75
C11orf42Q8N5U0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf42Q8N5U0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
C11orf42Q8N5U0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf42Q8N5U0 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf42Q8N5U0 AC096887.2-201ENST00000623443 1957 ntBASIC19.74■□□□□ 0.75
C11orf42Q8N5U0 AC145676.1-201ENST00000514988 2004 ntBASIC19.73■□□□□ 0.75
C11orf42Q8N5U0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf42Q8N5U0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
C11orf42Q8N5U0 AC004987.1-201ENST00000428627 508 ntBASIC19.73■□□□□ 0.75
C11orf42Q8N5U0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
C11orf42Q8N5U0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf42Q8N5U0 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf42Q8N5U0 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf42Q8N5U0 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
C11orf42Q8N5U0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
C11orf42Q8N5U0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
C11orf42Q8N5U0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
C11orf42Q8N5U0 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
C11orf42Q8N5U0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.72■□□□□ 0.75
C11orf42Q8N5U0 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C11orf42Q8N5U0 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C11orf42Q8N5U0 ATP5G2P3-201ENST00000429083 425 ntBASIC19.71■□□□□ 0.75
C11orf42Q8N5U0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.71■□□□□ 0.75
C11orf42Q8N5U0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.71■□□□□ 0.75
C11orf42Q8N5U0 AC012354.3-201ENST00000623734 483 ntBASIC19.71■□□□□ 0.75
C11orf42Q8N5U0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
C11orf42Q8N5U0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
C11orf42Q8N5U0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
C11orf42Q8N5U0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.7■□□□□ 0.74
C11orf42Q8N5U0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
C11orf42Q8N5U0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C11orf42Q8N5U0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.7■□□□□ 0.74
C11orf42Q8N5U0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
C11orf42Q8N5U0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.7■□□□□ 0.74
C11orf42Q8N5U0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.7■□□□□ 0.74
C11orf42Q8N5U0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C11orf42Q8N5U0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
C11orf42Q8N5U0 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
C11orf42Q8N5U0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
C11orf42Q8N5U0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
C11orf42Q8N5U0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
C11orf42Q8N5U0 AC018755.3-202ENST00000596210 929 ntBASIC19.69■□□□□ 0.74
C11orf42Q8N5U0 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
C11orf42Q8N5U0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.69■□□□□ 0.74
C11orf42Q8N5U0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
C11orf42Q8N5U0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
C11orf42Q8N5U0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.68■□□□□ 0.74
C11orf42Q8N5U0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C11orf42Q8N5U0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
C11orf42Q8N5U0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.68■□□□□ 0.74
C11orf42Q8N5U0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.68■□□□□ 0.74
C11orf42Q8N5U0 MIR6765-201ENST00000614092 87 ntBASIC19.68■□□□□ 0.74
C11orf42Q8N5U0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
C11orf42Q8N5U0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
C11orf42Q8N5U0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.68■□□□□ 0.74
C11orf42Q8N5U0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
C11orf42Q8N5U0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
C11orf42Q8N5U0 TSPY13P-201ENST00000338964 914 ntBASIC19.67■□□□□ 0.74
C11orf42Q8N5U0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C11orf42Q8N5U0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
C11orf42Q8N5U0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
C11orf42Q8N5U0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C11orf42Q8N5U0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.66■□□□□ 0.74
C11orf42Q8N5U0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
C11orf42Q8N5U0 DUX4L18-201ENST00000553347 1267 ntBASIC19.66■□□□□ 0.74
C11orf42Q8N5U0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
C11orf42Q8N5U0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
C11orf42Q8N5U0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
C11orf42Q8N5U0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
C11orf42Q8N5U0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.66■□□□□ 0.74
C11orf42Q8N5U0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.65■□□□□ 0.74
C11orf42Q8N5U0 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
C11orf42Q8N5U0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
C11orf42Q8N5U0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
C11orf42Q8N5U0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
C11orf42Q8N5U0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
C11orf42Q8N5U0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C11orf42Q8N5U0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
C11orf42Q8N5U0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
C11orf42Q8N5U0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
C11orf42Q8N5U0 AL033527.3-201ENST00000566366 1196 ntBASIC19.65■□□□□ 0.74
C11orf42Q8N5U0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C11orf42Q8N5U0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
C11orf42Q8N5U0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
C11orf42Q8N5U0 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
C11orf42Q8N5U0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
C11orf42Q8N5U0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
C11orf42Q8N5U0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
C11orf42Q8N5U0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms