Protein–RNA interactions for Protein: Q86XP3

DDX42, ATP-dependent RNA helicase DDX42, humanhuman

Known RBP eCLIP

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42Q86XP3 HMGN2-204ENST00000464888 565 ntTSL 211.09□□□□□ -0.634e-7■□□□□ 11
DDX42Q86XP3 HMGN2-203ENST00000463817 853 ntTSL 28.96□□□□□ -0.984e-7■□□□□ 11
DDX42Q86XP3 HMGN2-208ENST00000479815 1030 ntTSL 58.96□□□□□ -0.984e-7■□□□□ 11
DDX42Q86XP3 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.084e-7■□□□□ 11
DDX42Q86XP3 HMGN2-206ENST00000467700 932 ntTSL 27.85□□□□□ -1.154e-7■□□□□ 11
DDX42Q86XP3 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.244e-7■□□□□ 11
DDX42Q86XP3 HMGN2-207ENST00000468388 320 ntTSL 37.29□□□□□ -1.244e-7■□□□□ 11
DDX42Q86XP3 DDX5-228ENST00000584279 676 ntTSL 321.66■■□□□ 1.063e-6■□□□□ 11
DDX42Q86XP3 DDX5-205ENST00000577922 996 ntTSL 521.66■■□□□ 1.063e-6■□□□□ 11
DDX42Q86XP3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.413e-6■□□□□ 11
DDX42Q86XP3 DDX5-220ENST00000581806 576 ntTSL 416.96■□□□□ 0.313e-6■□□□□ 11
DDX42Q86XP3 DDX5-232ENST00000585111 1051 ntTSL 215.86■□□□□ 0.133e-6■□□□□ 11
DDX42Q86XP3 DDX5-219ENST00000581697 580 ntTSL 515.55■□□□□ 0.083e-6■□□□□ 11
DDX42Q86XP3 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.1■□□□□ 0.013e-6■□□□□ 11
DDX42Q86XP3 DDX5-207ENST00000578400 575 ntTSL 514.43□□□□□ -0.13e-6■□□□□ 11
DDX42Q86XP3 DDX5-218ENST00000581693 2156 ntTSL 512.36□□□□□ -0.433e-6■□□□□ 11
DDX42Q86XP3 DDX5-203ENST00000540698 2225 ntTSL 512.17□□□□□ -0.463e-6■□□□□ 11
DDX42Q86XP3 DDX5-202ENST00000450599 2077 ntTSL 2 BASIC11.87□□□□□ -0.513e-6■□□□□ 11
DDX42Q86XP3 DDX5-233ENST00000585223 699 ntTSL 211.66□□□□□ -0.543e-6■□□□□ 11
DDX42Q86XP3 DDX5-231ENST00000585060 572 ntTSL 49.67□□□□□ -0.863e-6■□□□□ 11
DDX42Q86XP3 DDX5-215ENST00000581230 3558 ntTSL 28.98□□□□□ -0.973e-6■□□□□ 11
DDX42Q86XP3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.461e-6■□□□□ 11
DDX42Q86XP3 PRSS21-208ENST00000575199 679 ntTSL 222.59■■□□□ 1.211e-6■□□□□ 11
DDX42Q86XP3 PRSS21-207ENST00000574813 873 ntTSL 319.83■□□□□ 0.771e-6■□□□□ 11
DDX42Q86XP3 PRSS21-210ENST00000577043 814 ntTSL 519.65■□□□□ 0.741e-6■□□□□ 11
DDX42Q86XP3 PRSS21-203ENST00000570594 809 ntTSL 319.61■□□□□ 0.731e-6■□□□□ 11
DDX42Q86XP3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.34■□□□□ 0.531e-6■□□□□ 11
DDX42Q86XP3 PRSS21-206ENST00000574265 860 ntTSL 313.36□□□□□ -0.271e-6■□□□□ 11
DDX42Q86XP3 PRSS21-204ENST00000570629 626 ntTSL 213.07□□□□□ -0.321e-6■□□□□ 11
DDX42Q86XP3 PRSS21-209ENST00000575739 378 ntTSL 39.43□□□□□ -0.91e-6■□□□□ 11
DDX42Q86XP3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.251e-10■□□□□ 11
DDX42Q86XP3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.59■□□□□ 0.251e-10■□□□□ 11
DDX42Q86XP3 FTH1-206ENST00000530019 550 ntTSL 416.59■□□□□ 0.251e-10■□□□□ 11
DDX42Q86XP3 FTH1-211ENST00000534719 788 ntTSL 1 (best)14.54□□□□□ -0.081e-10■□□□□ 11
DDX42Q86XP3 FTH1-210ENST00000534180 983 ntTSL 214.33□□□□□ -0.121e-10■□□□□ 11
DDX42Q86XP3 FTH1-205ENST00000529631 507 ntTSL 4 BASIC13.39□□□□□ -0.271e-10■□□□□ 11
DDX42Q86XP3 FTH1-208ENST00000532829 912 ntTSL 213.26□□□□□ -0.291e-10■□□□□ 11
DDX42Q86XP3 FTH1-209ENST00000533138 885 ntTSL 512□□□□□ -0.491e-10■□□□□ 11
DDX42Q86XP3 FTH1-203ENST00000529191 530 ntTSL 2 BASIC11.87□□□□□ -0.511e-10■□□□□ 11
DDX42Q86XP3 FTH1-212ENST00000620041 825 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.981e-10■□□□□ 11
DDX42Q86XP3 FTH1-207ENST00000532601 742 ntTSL 3 BASIC8.69□□□□□ -1.021e-10■□□□□ 11
DDX42Q86XP3 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.145e-42■□□□□ 11
DDX42Q86XP3 HMGCS1-202ENST00000433297 3466 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.365e-42■□□□□ 11
DDX42Q86XP3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.04■■■□□ 2.243e-7■□□□□ 10.9
DDX42Q86XP3 HNRNPDL-203ENST00000502762 2356 ntTSL 1 (best)22.34■■□□□ 1.174e-14■□□□□ 10.9
DDX42Q86XP3 GRK2-207ENST00000529738 500 ntTSL 222.16■■□□□ 1.143e-7■□□□□ 10.9
DDX42Q86XP3 HNRNPDL-209ENST00000630114 1433 ntTSL 521.65■■□□□ 1.064e-14■□□□□ 10.9
DDX42Q86XP3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.023e-7■□□□□ 10.9
DDX42Q86XP3 FLNA-215ENST00000474358 696 ntTSL 218.65■□□□□ 0.583e-7■□□□□ 10.9
DDX42Q86XP3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.524e-14■□□□□ 10.9
DDX42Q86XP3 HNRNPDL-202ENST00000349655 1402 ntTSL 1 (best)18.03■□□□□ 0.484e-14■□□□□ 10.9
DDX42Q86XP3 FLNA-209ENST00000444578 843 ntTSL 317.86■□□□□ 0.453e-7■□□□□ 10.9
DDX42Q86XP3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.434e-14■□□□□ 10.9
DDX42Q86XP3 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.393e-7■□□□□ 10.9
DDX42Q86XP3 HNRNPDL-205ENST00000514511 1143 ntTSL 217.02■□□□□ 0.324e-14■□□□□ 10.9
DDX42Q86XP3 ATXN2L-214ENST00000564284 603 ntTSL 216.85■□□□□ 0.293e-7■□□□□ 10.9
DDX42Q86XP3 FLNA-216ENST00000490936 5374 ntTSL 1 (best)16.59■□□□□ 0.253e-7■□□□□ 10.9
DDX42Q86XP3 ATXN2L-226ENST00000570284 701 ntTSL 516.4■□□□□ 0.223e-7■□□□□ 10.9
DDX42Q86XP3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.214e-14■□□□□ 10.9
DDX42Q86XP3 FLNA-217ENST00000498411 368 ntTSL 315.69■□□□□ 0.13e-7■□□□□ 10.9
DDX42Q86XP3 GRK2-202ENST00000416281 4493 ntTSL 214.9□□□□□ -0.023e-7■□□□□ 10.9
DDX42Q86XP3 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC14.83□□□□□ -0.034e-14■□□□□ 10.9
DDX42Q86XP3 HNRNPDL-201ENST00000295470 3781 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.474e-14■□□□□ 10.9
DDX42Q86XP3 GRK2-213ENST00000533077 3453 ntTSL 211.84□□□□□ -0.513e-7■□□□□ 10.9
DDX42Q86XP3 SNX9-202ENST00000614703 542 ntTSL 410.33□□□□□ -0.763e-7■□□□□ 10.9
DDX42Q86XP3 HNRNPDL-204ENST00000507721 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.854e-14■□□□□ 10.9
DDX42Q86XP3 SNX9-203ENST00000614800 553 ntTSL 46.88□□□□□ -1.313e-7■□□□□ 10.9
DDX42Q86XP3 HMGN1-217ENST00000489072 1014 ntTSL 326.38■■□□□ 1.814e-6■□□□□ 10.9
DDX42Q86XP3 HMGN1-207ENST00000436324 1045 ntTSL 219.32■□□□□ 0.684e-6■□□□□ 10.9
DDX42Q86XP3 HMGN1-219ENST00000491183 527 ntTSL 219.03■□□□□ 0.644e-6■□□□□ 10.9
DDX42Q86XP3 HMGN1-206ENST00000431390 1552 ntTSL 318.73■□□□□ 0.594e-6■□□□□ 10.9
DDX42Q86XP3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.48■□□□□ 0.554e-6■□□□□ 10.9
DDX42Q86XP3 HMGN1-212ENST00000479586 841 ntTSL 218.48■□□□□ 0.554e-6■□□□□ 10.9
DDX42Q86XP3 HMGN1-209ENST00000463631 583 ntTSL 318.44■□□□□ 0.544e-6■□□□□ 10.9
DDX42Q86XP3 HMGN1-210ENST00000464078 508 ntTSL 518.44■□□□□ 0.544e-6■□□□□ 10.9
DDX42Q86XP3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.534e-6■□□□□ 10.9
DDX42Q86XP3 HMGN1-214ENST00000482733 701 ntTSL 217.46■□□□□ 0.394e-6■□□□□ 10.9
DDX42Q86XP3 HMGN1-208ENST00000443046 823 ntTSL 315.36■□□□□ 0.054e-6■□□□□ 10.9
DDX42Q86XP3 HMGN1-216ENST00000486741 4299 ntTSL 214.24□□□□□ -0.134e-6■□□□□ 10.9
DDX42Q86XP3 HMGN1-220ENST00000492280 2707 ntTSL 513.58□□□□□ -0.244e-6■□□□□ 10.9
DDX42Q86XP3 HMGN1-202ENST00000380747 709 ntTSL 3 BASIC9.69□□□□□ -0.864e-6■□□□□ 10.9
DDX42Q86XP3 HMGN1-201ENST00000288344 1303 ntTSL 29.58□□□□□ -0.884e-6■□□□□ 10.9
DDX42Q86XP3 HMGN1-205ENST00000419378 850 ntTSL 27.26□□□□□ -1.254e-6■□□□□ 10.9
DDX42Q86XP3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.92■□□□□ 0.32e-9■□□□□ 10.8
DDX42Q86XP3 RHAG-201ENST00000229810 1283 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.621e-10■□□□□ 10.7
DDX42Q86XP3 RHAG-202ENST00000371175 1912 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.771e-10■□□□□ 10.7
DDX42Q86XP3 RHAG-203ENST00000618248 1203 ntTSL 5 BASIC10.23□□□□□ -0.771e-10■□□□□ 10.7
DDX42Q86XP3 SETD5-209ENST00000431285 1824 ntTSL 524.77■■□□□ 1.562e-6■□□□□ 10.7
DDX42Q86XP3 SETD5-212ENST00000450326 921 ntTSL 316.53■□□□□ 0.242e-6■□□□□ 10.7
DDX42Q86XP3 SETD5-211ENST00000443339 3478 ntTSL 211.55□□□□□ -0.562e-6■□□□□ 10.7
DDX42Q86XP3 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.612e-6■□□□□ 10.7
DDX42Q86XP3 SETD5-201ENST00000302463 4786 ntTSL 1 (best) BASIC10.12□□□□□ -0.792e-6■□□□□ 10.7
DDX42Q86XP3 SETD5-210ENST00000442373 900 ntTSL 59.87□□□□□ -0.832e-6■□□□□ 10.7
DDX42Q86XP3 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.79□□□□□ -12e-6■□□□□ 10.7
DDX42Q86XP3 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.062e-6■□□□□ 10.7
DDX42Q86XP3 SETD5-228ENST00000493918 4861 ntTSL 1 (best)7.66□□□□□ -1.182e-6■□□□□ 10.7
DDX42Q86XP3 SETD5-226ENST00000490791 667 ntTSL 37.42□□□□□ -1.222e-6■□□□□ 10.7
DDX42Q86XP3 GOLGA2-209ENST00000490257 1964 ntTSL 219.22■□□□□ 0.671e-6■□□□□ 10.6
DDX42Q86XP3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.13■□□□□ 0.491e-6■□□□□ 10.6
DDX42Q86XP3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.78■□□□□ 0.121e-6■□□□□ 10.6
Retrieved 100 of 2,477 protein–RNA pairs in 68.2 ms