Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RTTNQ86VV8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RTTNQ86VV8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTTNQ86VV8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTTNQ86VV8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.96■□□□□ 0.95
RTTNQ86VV8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTTNQ86VV8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTTNQ86VV8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RTTNQ86VV8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.96■□□□□ 0.95
RTTNQ86VV8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTTNQ86VV8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RTTNQ86VV8 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.95■□□□□ 0.94
RTTNQ86VV8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTTNQ86VV8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTTNQ86VV8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
RTTNQ86VV8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
RTTNQ86VV8 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.95■□□□□ 0.94
RTTNQ86VV8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RTTNQ86VV8 DUSP8P4-201ENST00000399538 1761 ntBASIC20.94■□□□□ 0.94
RTTNQ86VV8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RTTNQ86VV8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTTNQ86VV8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RTTNQ86VV8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RTTNQ86VV8 MIR3960-201ENST00000583311 91 ntBASIC20.94■□□□□ 0.94
RTTNQ86VV8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RTTNQ86VV8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTTNQ86VV8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTTNQ86VV8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.93■□□□□ 0.94
RTTNQ86VV8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTTNQ86VV8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTTNQ86VV8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RTTNQ86VV8 SPCS2P3-201ENST00000500401 656 ntBASIC20.93■□□□□ 0.94
RTTNQ86VV8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
RTTNQ86VV8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.92■□□□□ 0.94
RTTNQ86VV8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RTTNQ86VV8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTTNQ86VV8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.92■□□□□ 0.94
RTTNQ86VV8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTTNQ86VV8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.92■□□□□ 0.94
RTTNQ86VV8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RTTNQ86VV8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RTTNQ86VV8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RTTNQ86VV8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
RTTNQ86VV8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RTTNQ86VV8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.91■□□□□ 0.94
RTTNQ86VV8 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RTTNQ86VV8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RTTNQ86VV8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RTTNQ86VV8 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTTNQ86VV8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTTNQ86VV8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTTNQ86VV8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RTTNQ86VV8 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.9■□□□□ 0.94
RTTNQ86VV8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RTTNQ86VV8 RP9P-202ENST00000450133 1212 ntBASIC20.9■□□□□ 0.94
RTTNQ86VV8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTTNQ86VV8 AC129492.7-201ENST00000622992 756 ntBASIC20.9■□□□□ 0.94
RTTNQ86VV8 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RTTNQ86VV8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RTTNQ86VV8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.89■□□□□ 0.94
RTTNQ86VV8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RTTNQ86VV8 AL592293.1-201ENST00000502889 1188 ntBASIC20.89■□□□□ 0.94
RTTNQ86VV8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.89■□□□□ 0.93
RTTNQ86VV8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTTNQ86VV8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTTNQ86VV8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTTNQ86VV8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RTTNQ86VV8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.89■□□□□ 0.93
RTTNQ86VV8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.89■□□□□ 0.93
RTTNQ86VV8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RTTNQ86VV8 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.89■□□□□ 0.93
RTTNQ86VV8 AC135731.1-201ENST00000569415 2548 ntBASIC20.89■□□□□ 0.93
RTTNQ86VV8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.88■□□□□ 0.93
RTTNQ86VV8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTTNQ86VV8 AC145676.1-201ENST00000514988 2004 ntBASIC20.88■□□□□ 0.93
RTTNQ86VV8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RTTNQ86VV8 AC097639.1-201ENST00000565519 1891 ntBASIC20.88■□□□□ 0.93
RTTNQ86VV8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RTTNQ86VV8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RTTNQ86VV8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTTNQ86VV8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTTNQ86VV8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTTNQ86VV8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RTTNQ86VV8 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RTTNQ86VV8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RTTNQ86VV8 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.86■□□□□ 0.93
RTTNQ86VV8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTTNQ86VV8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTTNQ86VV8 DUX4L9-201ENST00000449051 1259 ntBASIC20.86■□□□□ 0.93
RTTNQ86VV8 AC022211.4-201ENST00000625094 2161 ntBASIC20.86■□□□□ 0.93
RTTNQ86VV8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTTNQ86VV8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RTTNQ86VV8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTTNQ86VV8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTTNQ86VV8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTTNQ86VV8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTTNQ86VV8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTTNQ86VV8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTTNQ86VV8 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTTNQ86VV8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms