Protein–RNA interactions for Protein: Q6ZMD2

SPNS3, Protein spinster homolog 3, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3Q6ZMD2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPNS3Q6ZMD2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPNS3Q6ZMD2 AC026271.2-201ENST00000428091 497 ntBASIC20.63■□□□□ 0.89
SPNS3Q6ZMD2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SPNS3Q6ZMD2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SPNS3Q6ZMD2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPNS3Q6ZMD2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
SPNS3Q6ZMD2 AC022616.5-201ENST00000518796 181 ntBASIC20.62■□□□□ 0.89
SPNS3Q6ZMD2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.62■□□□□ 0.89
SPNS3Q6ZMD2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SPNS3Q6ZMD2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPNS3Q6ZMD2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SPNS3Q6ZMD2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SPNS3Q6ZMD2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SPNS3Q6ZMD2 AC096631.2-201ENST00000436136 790 ntBASIC20.61■□□□□ 0.89
SPNS3Q6ZMD2 TSPY9P-201ENST00000440215 945 ntBASIC20.61■□□□□ 0.89
SPNS3Q6ZMD2 TSPY11P-201ENST00000442607 1045 ntBASIC20.61■□□□□ 0.89
SPNS3Q6ZMD2 MIR5787-201ENST00000611784 55 ntBASIC20.61■□□□□ 0.89
SPNS3Q6ZMD2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.61■□□□□ 0.89
SPNS3Q6ZMD2 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPNS3Q6ZMD2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SPNS3Q6ZMD2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.6■□□□□ 0.89
SPNS3Q6ZMD2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.6■□□□□ 0.89
SPNS3Q6ZMD2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.6■□□□□ 0.89
SPNS3Q6ZMD2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SPNS3Q6ZMD2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPNS3Q6ZMD2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPNS3Q6ZMD2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPNS3Q6ZMD2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPNS3Q6ZMD2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPNS3Q6ZMD2 ZNRF2P3-201ENST00000424200 374 ntBASIC20.59■□□□□ 0.89
SPNS3Q6ZMD2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPNS3Q6ZMD2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SPNS3Q6ZMD2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SPNS3Q6ZMD2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SPNS3Q6ZMD2 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPNS3Q6ZMD2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SPNS3Q6ZMD2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPNS3Q6ZMD2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SPNS3Q6ZMD2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.58■□□□□ 0.89
SPNS3Q6ZMD2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SPNS3Q6ZMD2 AC137630.3-201ENST00000607245 391 ntBASIC20.58■□□□□ 0.89
SPNS3Q6ZMD2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SPNS3Q6ZMD2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPNS3Q6ZMD2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.57■□□□□ 0.88
SPNS3Q6ZMD2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.57■□□□□ 0.88
SPNS3Q6ZMD2 RPS2P7-201ENST00000447334 885 ntBASIC20.57■□□□□ 0.88
SPNS3Q6ZMD2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.57■□□□□ 0.88
SPNS3Q6ZMD2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.57■□□□□ 0.88
SPNS3Q6ZMD2 AL121749.1-202ENST00000609313 2153 ntBASIC20.57■□□□□ 0.88
SPNS3Q6ZMD2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPNS3Q6ZMD2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SPNS3Q6ZMD2 AC021242.3-201ENST00000607598 1377 ntBASIC20.57■□□□□ 0.88
SPNS3Q6ZMD2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SPNS3Q6ZMD2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPNS3Q6ZMD2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPNS3Q6ZMD2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPNS3Q6ZMD2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPNS3Q6ZMD2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SPNS3Q6ZMD2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPNS3Q6ZMD2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPNS3Q6ZMD2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SPNS3Q6ZMD2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SPNS3Q6ZMD2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.54■□□□□ 0.88
SPNS3Q6ZMD2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
SPNS3Q6ZMD2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPNS3Q6ZMD2 KRT18P24-201ENST00000344739 1156 ntBASIC20.54■□□□□ 0.88
SPNS3Q6ZMD2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.54■□□□□ 0.88
SPNS3Q6ZMD2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPNS3Q6ZMD2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPNS3Q6ZMD2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SPNS3Q6ZMD2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SPNS3Q6ZMD2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.53■□□□□ 0.88
SPNS3Q6ZMD2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.53■□□□□ 0.88
SPNS3Q6ZMD2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPNS3Q6ZMD2 MIR3621-201ENST00000580529 85 ntBASIC20.53■□□□□ 0.88
SPNS3Q6ZMD2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPNS3Q6ZMD2 AL117332.1-201ENST00000622628 974 ntBASIC20.53■□□□□ 0.88
SPNS3Q6ZMD2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SPNS3Q6ZMD2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.53■□□□□ 0.88
SPNS3Q6ZMD2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPNS3Q6ZMD2 AC135279.3-201ENST00000610945 1311 ntBASIC20.53■□□□□ 0.88
SPNS3Q6ZMD2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
SPNS3Q6ZMD2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.52■□□□□ 0.88
SPNS3Q6ZMD2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SPNS3Q6ZMD2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.52■□□□□ 0.87
SPNS3Q6ZMD2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPNS3Q6ZMD2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.51■□□□□ 0.87
SPNS3Q6ZMD2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SPNS3Q6ZMD2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.51■□□□□ 0.87
SPNS3Q6ZMD2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPNS3Q6ZMD2 AC092028.1-203ENST00000608262 953 ntBASIC20.51■□□□□ 0.87
SPNS3Q6ZMD2 DRD5P2-201ENST00000421395 2012 ntBASIC20.51■□□□□ 0.87
SPNS3Q6ZMD2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.51■□□□□ 0.87
SPNS3Q6ZMD2 AL139393.2-201ENST00000608721 2025 ntBASIC20.5■□□□□ 0.87
SPNS3Q6ZMD2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPNS3Q6ZMD2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPNS3Q6ZMD2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SPNS3Q6ZMD2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPNS3Q6ZMD2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms