Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.68■■□□□ 1.54
FOXR1Q6PIV2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
FOXR1Q6PIV2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.67■■□□□ 1.54
FOXR1Q6PIV2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
FOXR1Q6PIV2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
FOXR1Q6PIV2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
FOXR1Q6PIV2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
FOXR1Q6PIV2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
FOXR1Q6PIV2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
FOXR1Q6PIV2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
FOXR1Q6PIV2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC24.66■■□□□ 1.54
FOXR1Q6PIV2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC24.66■■□□□ 1.54
FOXR1Q6PIV2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
FOXR1Q6PIV2 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
FOXR1Q6PIV2 AC127502.1-201ENST00000399971 1502 ntBASIC24.65■■□□□ 1.54
FOXR1Q6PIV2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
FOXR1Q6PIV2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
FOXR1Q6PIV2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
FOXR1Q6PIV2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
FOXR1Q6PIV2 AC008813.1-201ENST00000536597 885 ntBASIC24.64■■□□□ 1.54
FOXR1Q6PIV2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.64■■□□□ 1.53
FOXR1Q6PIV2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
FOXR1Q6PIV2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
FOXR1Q6PIV2 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.63■■□□□ 1.53
FOXR1Q6PIV2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
FOXR1Q6PIV2 NTF6A-201ENST00000591175 560 ntBASIC24.63■■□□□ 1.53
FOXR1Q6PIV2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.63■■□□□ 1.53
FOXR1Q6PIV2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.62■■□□□ 1.53
FOXR1Q6PIV2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
FOXR1Q6PIV2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
FOXR1Q6PIV2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
FOXR1Q6PIV2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.62■■□□□ 1.53
FOXR1Q6PIV2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
FOXR1Q6PIV2 WHAMMP2-203ENST00000563942 1603 ntBASIC24.61■■□□□ 1.53
FOXR1Q6PIV2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.61■■□□□ 1.53
FOXR1Q6PIV2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.61■■□□□ 1.53
FOXR1Q6PIV2 AC012354.3-201ENST00000623734 483 ntBASIC24.61■■□□□ 1.53
FOXR1Q6PIV2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
FOXR1Q6PIV2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
FOXR1Q6PIV2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
FOXR1Q6PIV2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
FOXR1Q6PIV2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
FOXR1Q6PIV2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
FOXR1Q6PIV2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
FOXR1Q6PIV2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
FOXR1Q6PIV2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
FOXR1Q6PIV2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
FOXR1Q6PIV2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
FOXR1Q6PIV2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
FOXR1Q6PIV2 AC022211.4-201ENST00000625094 2161 ntBASIC24.6■■□□□ 1.53
FOXR1Q6PIV2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.6■■□□□ 1.53
FOXR1Q6PIV2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
FOXR1Q6PIV2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
FOXR1Q6PIV2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
FOXR1Q6PIV2 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
FOXR1Q6PIV2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
FOXR1Q6PIV2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
FOXR1Q6PIV2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
FOXR1Q6PIV2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
FOXR1Q6PIV2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
FOXR1Q6PIV2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.58■■□□□ 1.53
FOXR1Q6PIV2 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
FOXR1Q6PIV2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
FOXR1Q6PIV2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
FOXR1Q6PIV2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
FOXR1Q6PIV2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.53
FOXR1Q6PIV2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
FOXR1Q6PIV2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
FOXR1Q6PIV2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
FOXR1Q6PIV2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
FOXR1Q6PIV2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.57■■□□□ 1.52
FOXR1Q6PIV2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
FOXR1Q6PIV2 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
FOXR1Q6PIV2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
FOXR1Q6PIV2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
FOXR1Q6PIV2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
FOXR1Q6PIV2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
FOXR1Q6PIV2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.56■■□□□ 1.52
FOXR1Q6PIV2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
FOXR1Q6PIV2 AP004609.3-201ENST00000610705 1884 ntBASIC24.56■■□□□ 1.52
FOXR1Q6PIV2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
FOXR1Q6PIV2 AC135983.2-203ENST00000454486 1613 ntBASIC24.56■■□□□ 1.52
FOXR1Q6PIV2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
FOXR1Q6PIV2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.56■■□□□ 1.52
FOXR1Q6PIV2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
FOXR1Q6PIV2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
FOXR1Q6PIV2 AC018358.1-201ENST00000631079 1402 ntBASIC24.55■■□□□ 1.52
FOXR1Q6PIV2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
FOXR1Q6PIV2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
FOXR1Q6PIV2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
FOXR1Q6PIV2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.55■■□□□ 1.52
FOXR1Q6PIV2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
FOXR1Q6PIV2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
FOXR1Q6PIV2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
FOXR1Q6PIV2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
FOXR1Q6PIV2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
FOXR1Q6PIV2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC24.54■■□□□ 1.52
FOXR1Q6PIV2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
FOXR1Q6PIV2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.54■■□□□ 1.52
FOXR1Q6PIV2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms