Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PTCRAQ6ISU1 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
PTCRAQ6ISU1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25.14■■□□□ 1.62
PTCRAQ6ISU1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC25.14■■□□□ 1.61
PTCRAQ6ISU1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PTCRAQ6ISU1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.13■■□□□ 1.61
PTCRAQ6ISU1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.13■■□□□ 1.61
PTCRAQ6ISU1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.13■■□□□ 1.61
PTCRAQ6ISU1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PTCRAQ6ISU1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PTCRAQ6ISU1 AL139393.2-201ENST00000608721 2025 ntBASIC25.12■■□□□ 1.61
PTCRAQ6ISU1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PTCRAQ6ISU1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.12■■□□□ 1.61
PTCRAQ6ISU1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PTCRAQ6ISU1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.12■■□□□ 1.61
PTCRAQ6ISU1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.12■■□□□ 1.61
PTCRAQ6ISU1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
PTCRAQ6ISU1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
PTCRAQ6ISU1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.11■■□□□ 1.61
PTCRAQ6ISU1 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PTCRAQ6ISU1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.1■■□□□ 1.61
PTCRAQ6ISU1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
PTCRAQ6ISU1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.1■■□□□ 1.61
PTCRAQ6ISU1 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.1■■□□□ 1.61
PTCRAQ6ISU1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PTCRAQ6ISU1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.1■■□□□ 1.61
PTCRAQ6ISU1 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PTCRAQ6ISU1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.09■■□□□ 1.61
PTCRAQ6ISU1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PTCRAQ6ISU1 SUDS3P1-201ENST00000505831 966 ntBASIC25.09■■□□□ 1.61
PTCRAQ6ISU1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
PTCRAQ6ISU1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
PTCRAQ6ISU1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
PTCRAQ6ISU1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC25.08■■□□□ 1.61
PTCRAQ6ISU1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.08■■□□□ 1.6
PTCRAQ6ISU1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
PTCRAQ6ISU1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PTCRAQ6ISU1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
PTCRAQ6ISU1 AL031432.3-201ENST00000607698 485 ntBASIC25.07■■□□□ 1.6
PTCRAQ6ISU1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
PTCRAQ6ISU1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PTCRAQ6ISU1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.06■■□□□ 1.6
PTCRAQ6ISU1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.06■■□□□ 1.6
PTCRAQ6ISU1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.06■■□□□ 1.6
PTCRAQ6ISU1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PTCRAQ6ISU1 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.06■■□□□ 1.6
PTCRAQ6ISU1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.06■■□□□ 1.6
PTCRAQ6ISU1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PTCRAQ6ISU1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.05■■□□□ 1.6
PTCRAQ6ISU1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
PTCRAQ6ISU1 UNC93B3-201ENST00000308076 687 ntBASIC25.05■■□□□ 1.6
PTCRAQ6ISU1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
PTCRAQ6ISU1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.05■■□□□ 1.6
PTCRAQ6ISU1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PTCRAQ6ISU1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PTCRAQ6ISU1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PTCRAQ6ISU1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
PTCRAQ6ISU1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
PTCRAQ6ISU1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.04■■□□□ 1.6
PTCRAQ6ISU1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PTCRAQ6ISU1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
PTCRAQ6ISU1 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PTCRAQ6ISU1 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PTCRAQ6ISU1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
PTCRAQ6ISU1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.03■■□□□ 1.6
PTCRAQ6ISU1 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.03■■□□□ 1.6
PTCRAQ6ISU1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.03■■□□□ 1.6
PTCRAQ6ISU1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.03■■□□□ 1.6
PTCRAQ6ISU1 AL136162.1-201ENST00000607711 1078 ntBASIC25.03■■□□□ 1.6
PTCRAQ6ISU1 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.03■■□□□ 1.6
PTCRAQ6ISU1 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PTCRAQ6ISU1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
PTCRAQ6ISU1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PTCRAQ6ISU1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PTCRAQ6ISU1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.02■■□□□ 1.6
PTCRAQ6ISU1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.02■■□□□ 1.6
PTCRAQ6ISU1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC25.02■■□□□ 1.6
PTCRAQ6ISU1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.02■■□□□ 1.6
PTCRAQ6ISU1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
PTCRAQ6ISU1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.01■■□□□ 1.59
PTCRAQ6ISU1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.01■■□□□ 1.59
PTCRAQ6ISU1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25■■□□□ 1.59
PTCRAQ6ISU1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PTCRAQ6ISU1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25■■□□□ 1.59
PTCRAQ6ISU1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PTCRAQ6ISU1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PTCRAQ6ISU1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.99■■□□□ 1.59
PTCRAQ6ISU1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.99■■□□□ 1.59
PTCRAQ6ISU1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PTCRAQ6ISU1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
PTCRAQ6ISU1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.98■■□□□ 1.59
PTCRAQ6ISU1 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.98■■□□□ 1.59
PTCRAQ6ISU1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
PTCRAQ6ISU1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
PTCRAQ6ISU1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
PTCRAQ6ISU1 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.97■■□□□ 1.59
PTCRAQ6ISU1 AC105265.2-201ENST00000467189 838 ntBASIC24.97■■□□□ 1.59
PTCRAQ6ISU1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.97■■□□□ 1.59
PTCRAQ6ISU1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PTCRAQ6ISU1 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms