Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SGO1Q5FBB7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SGO1Q5FBB7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SGO1Q5FBB7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SGO1Q5FBB7 ECEL1P2-201ENST00000461596 1295 ntBASIC23.09■■□□□ 1.29
SGO1Q5FBB7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.09■■□□□ 1.29
SGO1Q5FBB7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.09■■□□□ 1.29
SGO1Q5FBB7 MIR4449-201ENST00000578365 66 ntBASIC23.09■■□□□ 1.29
SGO1Q5FBB7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SGO1Q5FBB7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.09■■□□□ 1.29
SGO1Q5FBB7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.09■■□□□ 1.29
SGO1Q5FBB7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SGO1Q5FBB7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
SGO1Q5FBB7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
SGO1Q5FBB7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SGO1Q5FBB7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.08■■□□□ 1.29
SGO1Q5FBB7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.08■■□□□ 1.28
SGO1Q5FBB7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SGO1Q5FBB7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SGO1Q5FBB7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
SGO1Q5FBB7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
SGO1Q5FBB7 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.08■■□□□ 1.28
SGO1Q5FBB7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SGO1Q5FBB7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SGO1Q5FBB7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SGO1Q5FBB7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SGO1Q5FBB7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SGO1Q5FBB7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.07■■□□□ 1.28
SGO1Q5FBB7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
SGO1Q5FBB7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
SGO1Q5FBB7 AC142381.3-201ENST00000568208 1670 ntBASIC23.06■■□□□ 1.28
SGO1Q5FBB7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SGO1Q5FBB7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.06■■□□□ 1.28
SGO1Q5FBB7 AC097639.1-201ENST00000565519 1891 ntBASIC23.05■■□□□ 1.28
SGO1Q5FBB7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.05■■□□□ 1.28
SGO1Q5FBB7 AC138932.3-201ENST00000567634 1902 ntBASIC23.05■■□□□ 1.28
SGO1Q5FBB7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SGO1Q5FBB7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SGO1Q5FBB7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SGO1Q5FBB7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SGO1Q5FBB7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SGO1Q5FBB7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SGO1Q5FBB7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.04■■□□□ 1.28
SGO1Q5FBB7 GPX1-201ENST00000419349 1106 ntBASIC23.04■■□□□ 1.28
SGO1Q5FBB7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.04■■□□□ 1.28
SGO1Q5FBB7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.04■■□□□ 1.28
SGO1Q5FBB7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SGO1Q5FBB7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.04■■□□□ 1.28
SGO1Q5FBB7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SGO1Q5FBB7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SGO1Q5FBB7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.02■■□□□ 1.28
SGO1Q5FBB7 RP9P-202ENST00000450133 1212 ntBASIC23.02■■□□□ 1.28
SGO1Q5FBB7 AC093536.1-201ENST00000569153 554 ntBASIC23.02■■□□□ 1.28
SGO1Q5FBB7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.02■■□□□ 1.28
SGO1Q5FBB7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
SGO1Q5FBB7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SGO1Q5FBB7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SGO1Q5FBB7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SGO1Q5FBB7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.01■■□□□ 1.27
SGO1Q5FBB7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.01■■□□□ 1.27
SGO1Q5FBB7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.01■■□□□ 1.27
SGO1Q5FBB7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SGO1Q5FBB7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SGO1Q5FBB7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SGO1Q5FBB7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23■■□□□ 1.27
SGO1Q5FBB7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SGO1Q5FBB7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23■■□□□ 1.27
SGO1Q5FBB7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23■■□□□ 1.27
SGO1Q5FBB7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23■■□□□ 1.27
SGO1Q5FBB7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23■■□□□ 1.27
SGO1Q5FBB7 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SGO1Q5FBB7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SGO1Q5FBB7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SGO1Q5FBB7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SGO1Q5FBB7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.99■■□□□ 1.27
SGO1Q5FBB7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.99■■□□□ 1.27
SGO1Q5FBB7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.99■■□□□ 1.27
SGO1Q5FBB7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
SGO1Q5FBB7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SGO1Q5FBB7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SGO1Q5FBB7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SGO1Q5FBB7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SGO1Q5FBB7 AC007029.1-201ENST00000604183 313 ntBASIC22.98■■□□□ 1.27
SGO1Q5FBB7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
SGO1Q5FBB7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
SGO1Q5FBB7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
SGO1Q5FBB7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SGO1Q5FBB7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SGO1Q5FBB7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
SGO1Q5FBB7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SGO1Q5FBB7 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SGO1Q5FBB7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SGO1Q5FBB7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
SGO1Q5FBB7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SGO1Q5FBB7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SGO1Q5FBB7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SGO1Q5FBB7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SGO1Q5FBB7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.97■■□□□ 1.27
SGO1Q5FBB7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SGO1Q5FBB7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms