Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRFAM7AQ494W8 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRFAM7AQ494W8 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.66■□□□□ 0.9
CHRFAM7AQ494W8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRFAM7AQ494W8 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHRFAM7AQ494W8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHRFAM7AQ494W8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRFAM7AQ494W8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRFAM7AQ494W8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHRFAM7AQ494W8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.65■□□□□ 0.9
CHRFAM7AQ494W8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.64■□□□□ 0.9
CHRFAM7AQ494W8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.64■□□□□ 0.9
CHRFAM7AQ494W8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHRFAM7AQ494W8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHRFAM7AQ494W8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CHRFAM7AQ494W8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHRFAM7AQ494W8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.64■□□□□ 0.89
CHRFAM7AQ494W8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.64■□□□□ 0.89
CHRFAM7AQ494W8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.64■□□□□ 0.89
CHRFAM7AQ494W8 BHLHE23-202ENST00000612929 1109 ntBASIC20.64■□□□□ 0.89
CHRFAM7AQ494W8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRFAM7AQ494W8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRFAM7AQ494W8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRFAM7AQ494W8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRFAM7AQ494W8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHRFAM7AQ494W8 WHAMMP3-201ENST00000611636 1609 ntBASIC20.64■□□□□ 0.89
CHRFAM7AQ494W8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRFAM7AQ494W8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.63■□□□□ 0.89
CHRFAM7AQ494W8 AC093323.1-202ENST00000635031 2045 ntBASIC20.63■□□□□ 0.89
CHRFAM7AQ494W8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHRFAM7AQ494W8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRFAM7AQ494W8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHRFAM7AQ494W8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CHRFAM7AQ494W8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CHRFAM7AQ494W8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHRFAM7AQ494W8 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.63■□□□□ 0.89
CHRFAM7AQ494W8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
CHRFAM7AQ494W8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.63■□□□□ 0.89
CHRFAM7AQ494W8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.63■□□□□ 0.89
CHRFAM7AQ494W8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.63■□□□□ 0.89
CHRFAM7AQ494W8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.63■□□□□ 0.89
CHRFAM7AQ494W8 AC009831.1-201ENST00000580420 1582 ntBASIC20.63■□□□□ 0.89
CHRFAM7AQ494W8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CHRFAM7AQ494W8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRFAM7AQ494W8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CHRFAM7AQ494W8 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.62■□□□□ 0.89
CHRFAM7AQ494W8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRFAM7AQ494W8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHRFAM7AQ494W8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHRFAM7AQ494W8 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.61■□□□□ 0.89
CHRFAM7AQ494W8 AL157400.5-201ENST00000507624 621 ntBASIC20.61■□□□□ 0.89
CHRFAM7AQ494W8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CHRFAM7AQ494W8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRFAM7AQ494W8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRFAM7AQ494W8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHRFAM7AQ494W8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.61■□□□□ 0.89
CHRFAM7AQ494W8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHRFAM7AQ494W8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRFAM7AQ494W8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRFAM7AQ494W8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CHRFAM7AQ494W8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.6■□□□□ 0.89
CHRFAM7AQ494W8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHRFAM7AQ494W8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.6■□□□□ 0.89
CHRFAM7AQ494W8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRFAM7AQ494W8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CHRFAM7AQ494W8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHRFAM7AQ494W8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CHRFAM7AQ494W8 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.59■□□□□ 0.89
CHRFAM7AQ494W8 AC131212.1-201ENST00000613771 668 ntBASIC20.59■□□□□ 0.89
CHRFAM7AQ494W8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRFAM7AQ494W8 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.59■□□□□ 0.89
CHRFAM7AQ494W8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRFAM7AQ494W8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CHRFAM7AQ494W8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHRFAM7AQ494W8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHRFAM7AQ494W8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CHRFAM7AQ494W8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.58■□□□□ 0.89
CHRFAM7AQ494W8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHRFAM7AQ494W8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CHRFAM7AQ494W8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHRFAM7AQ494W8 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHRFAM7AQ494W8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
CHRFAM7AQ494W8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHRFAM7AQ494W8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHRFAM7AQ494W8 AC074183.2-201ENST00000623112 922 ntBASIC20.57■□□□□ 0.88
CHRFAM7AQ494W8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CHRFAM7AQ494W8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRFAM7AQ494W8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRFAM7AQ494W8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHRFAM7AQ494W8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHRFAM7AQ494W8 SMPD5-203ENST00000639008 1464 ntBASIC20.56■□□□□ 0.88
CHRFAM7AQ494W8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHRFAM7AQ494W8 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRFAM7AQ494W8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRFAM7AQ494W8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHRFAM7AQ494W8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.55■□□□□ 0.88
CHRFAM7AQ494W8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHRFAM7AQ494W8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.55■□□□□ 0.88
CHRFAM7AQ494W8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.55■□□□□ 0.88
CHRFAM7AQ494W8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms