Protein–RNA interactions for Protein: Q15078

CDK5R1, Cyclin-dependent kinase 5 activator 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1Q15078 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.99■□□□□ 0.95
CDK5R1Q15078 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.99■□□□□ 0.95
CDK5R1Q15078 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.99■□□□□ 0.95
CDK5R1Q15078 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5R1Q15078 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5R1Q15078 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5R1Q15078 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CDK5R1Q15078 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CDK5R1Q15078 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CDK5R1Q15078 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5R1Q15078 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDK5R1Q15078 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5R1Q15078 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5R1Q15078 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5R1Q15078 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CDK5R1Q15078 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5R1Q15078 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5R1Q15078 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.97■□□□□ 0.95
CDK5R1Q15078 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CDK5R1Q15078 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDK5R1Q15078 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.97■□□□□ 0.95
CDK5R1Q15078 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK5R1Q15078 HLA-V-202ENST00000446817 847 ntBASIC20.96■□□□□ 0.95
CDK5R1Q15078 LINC00543-201ENST00000567234 1845 ntBASIC20.96■□□□□ 0.95
CDK5R1Q15078 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
CDK5R1Q15078 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDK5R1Q15078 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK5R1Q15078 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK5R1Q15078 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDK5R1Q15078 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDK5R1Q15078 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK5R1Q15078 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
CDK5R1Q15078 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK5R1Q15078 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK5R1Q15078 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.95■□□□□ 0.94
CDK5R1Q15078 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDK5R1Q15078 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
CDK5R1Q15078 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDK5R1Q15078 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK5R1Q15078 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
CDK5R1Q15078 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CDK5R1Q15078 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.94■□□□□ 0.94
CDK5R1Q15078 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.94■□□□□ 0.94
CDK5R1Q15078 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK5R1Q15078 DUX4L11-201ENST00000611504 1267 ntBASIC20.94■□□□□ 0.94
CDK5R1Q15078 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.94■□□□□ 0.94
CDK5R1Q15078 DUX4L12-201ENST00000614593 1267 ntBASIC20.94■□□□□ 0.94
CDK5R1Q15078 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDK5R1Q15078 DUX4L14-201ENST00000621227 1267 ntBASIC20.94■□□□□ 0.94
CDK5R1Q15078 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK5R1Q15078 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.94■□□□□ 0.94
CDK5R1Q15078 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CDK5R1Q15078 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDK5R1Q15078 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK5R1Q15078 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK5R1Q15078 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CDK5R1Q15078 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK5R1Q15078 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK5R1Q15078 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDK5R1Q15078 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK5R1Q15078 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK5R1Q15078 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDK5R1Q15078 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDK5R1Q15078 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK5R1Q15078 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDK5R1Q15078 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDK5R1Q15078 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDK5R1Q15078 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.92■□□□□ 0.94
CDK5R1Q15078 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDK5R1Q15078 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDK5R1Q15078 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CDK5R1Q15078 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.92■□□□□ 0.94
CDK5R1Q15078 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDK5R1Q15078 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDK5R1Q15078 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CDK5R1Q15078 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.91■□□□□ 0.94
CDK5R1Q15078 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CDK5R1Q15078 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CDK5R1Q15078 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDK5R1Q15078 AC141586.4-201ENST00000624558 1573 ntBASIC20.9■□□□□ 0.94
CDK5R1Q15078 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDK5R1Q15078 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.9■□□□□ 0.94
CDK5R1Q15078 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.9■□□□□ 0.94
CDK5R1Q15078 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.9■□□□□ 0.94
CDK5R1Q15078 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDK5R1Q15078 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDK5R1Q15078 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5R1Q15078 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5R1Q15078 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5R1Q15078 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.93
CDK5R1Q15078 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.89■□□□□ 0.93
CDK5R1Q15078 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5R1Q15078 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5R1Q15078 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDK5R1Q15078 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.89■□□□□ 0.93
CDK5R1Q15078 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDK5R1Q15078 AC133561.1-201ENST00000568600 2415 ntBASIC20.88■□□□□ 0.93
CDK5R1Q15078 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CDK5R1Q15078 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.88■□□□□ 0.93
CDK5R1Q15078 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms