Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 GAT1YFL021W 1533 nt6.75□□□□□ -1.33
SSL2Q00578 GUA1YMR217W 1578 nt6.74□□□□□ -1.33
SSL2Q00578 CDC1YDR182W 1476 nt6.74□□□□□ -1.33
SSL2Q00578 CMR1YDL156W 1569 nt6.74□□□□□ -1.33
SSL2Q00578 AIM3YBR108W 2844 nt6.73□□□□□ -1.33
SSL2Q00578 GYP8YFL027C 1494 nt6.73□□□□□ -1.33
SSL2Q00578 YET3YDL072C 612 nt6.73□□□□□ -1.33
SSL2Q00578 snR82snR82 268 nt6.73□□□□□ -1.33
SSL2Q00578 YEL068CYEL068C 333 nt6.73□□□□□ -1.33
SSL2Q00578 MRS3YJL133W 945 nt6.73□□□□□ -1.33
SSL2Q00578 YKL153WYKL153W 510 nt6.73□□□□□ -1.33
SSL2Q00578 PSR2YLR019W 1194 nt6.73□□□□□ -1.33
SSL2Q00578 TSA1YML028W 591 nt6.73□□□□□ -1.33
SSL2Q00578 IVY1YDR229W 1362 nt6.72□□□□□ -1.33
SSL2Q00578 YFL052WYFL052W 1398 nt6.72□□□□□ -1.33
SSL2Q00578 PTK2YJR059W 2457 nt6.72□□□□□ -1.33
SSL2Q00578 HAS1YMR290C 1518 nt6.72□□□□□ -1.33
SSL2Q00578 YHP1YDR451C 1062 nt6.72□□□□□ -1.33
SSL2Q00578 PCL10YGL134W 1302 nt6.72□□□□□ -1.33
SSL2Q00578 YEL074WYEL074W 339 nt6.71□□□□□ -1.34
SSL2Q00578 BCY1YIL033C 1251 nt6.71□□□□□ -1.34
SSL2Q00578 SUP2tY(GUA)D 75 nt6.71□□□□□ -1.34
SSL2Q00578 SUP11tY(GUA)F1 75 nt6.71□□□□□ -1.34
SSL2Q00578 SUP6tY(GUA)F2 75 nt6.71□□□□□ -1.34
SSL2Q00578 SUP7tY(GUA)J1 75 nt6.71□□□□□ -1.34
SSL2Q00578 SUP4tY(GUA)J2 75 nt6.71□□□□□ -1.34
SSL2Q00578 SUP5tY(GUA)M1 75 nt6.71□□□□□ -1.34
SSL2Q00578 SUP8tY(GUA)M2 75 nt6.71□□□□□ -1.34
SSL2Q00578 SUP3tY(GUA)O 75 nt6.71□□□□□ -1.34
SSL2Q00578 NHP6BYBR089C-A 300 nt6.71□□□□□ -1.34
SSL2Q00578 AMA1YGR225W 1782 nt6.71□□□□□ -1.34
SSL2Q00578 ATG4YNL223W 1485 nt6.71□□□□□ -1.34
SSL2Q00578 OSW2YLR054C 2175 nt6.71□□□□□ -1.34
SSL2Q00578 PAP2YOL115W 1755 nt6.7□□□□□ -1.34
SSL2Q00578 CRF1YDR223W 1404 nt6.7□□□□□ -1.34
SSL2Q00578 MAK31YCR020C-A 267 nt6.7□□□□□ -1.34
SSL2Q00578 MSP1YGR028W 1089 nt6.7□□□□□ -1.34
SSL2Q00578 YJU3YKL094W 942 nt6.7□□□□□ -1.34
SSL2Q00578 OST3YOR085W 1053 nt6.7□□□□□ -1.34
SSL2Q00578 HST2YPL015C 1074 nt6.7□□□□□ -1.34
SSL2Q00578 POP1YNL221C 2628 nt6.69□□□□□ -1.34
SSL2Q00578 RPL10YLR075W 666 nt6.69□□□□□ -1.34
SSL2Q00578 GUF1YLR289W 1938 nt6.69□□□□□ -1.34
SSL2Q00578 ERC1YHR032W 1746 nt6.69□□□□□ -1.34
SSL2Q00578 IMG1YCR046C 510 nt6.68□□□□□ -1.34
SSL2Q00578 YDR401WYDR401W 564 nt6.68□□□□□ -1.34
SSL2Q00578 RME1YGR044C 903 nt6.68□□□□□ -1.34
SSL2Q00578 AAT2YLR027C 1257 nt6.68□□□□□ -1.34
SSL2Q00578 JNM1YMR294W 1122 nt6.68□□□□□ -1.34
SSL2Q00578 IFA38YBR159W 1044 nt6.68□□□□□ -1.34
SSL2Q00578 GIT1YCR098C 1557 nt6.67□□□□□ -1.34
SSL2Q00578 YDL218WYDL218W 954 nt6.67□□□□□ -1.34
SSL2Q00578 YDR034W-BYDR034W-B 156 nt6.67□□□□□ -1.34
SSL2Q00578 YNR040WYNR040W 771 nt6.67□□□□□ -1.34
SSL2Q00578 YPR150WYPR150W 522 nt6.67□□□□□ -1.34
SSL2Q00578 VHT1YGR065C 1782 nt6.67□□□□□ -1.34
SSL2Q00578 YFR006WYFR006W 1608 nt6.66□□□□□ -1.34
SSL2Q00578 LSM12YHR121W 564 nt6.66□□□□□ -1.34
SSL2Q00578 YHR145CYHR145C 357 nt6.66□□□□□ -1.34
SSL2Q00578 AIM20YIL158W 615 nt6.66□□□□□ -1.34
SSL2Q00578 YMR122CYMR122C 375 nt6.66□□□□□ -1.34
SSL2Q00578 SCS22YBL091C-A 528 nt6.66□□□□□ -1.34
SSL2Q00578 SEC20YDR498C 1152 nt6.65□□□□□ -1.34
SSL2Q00578 YGR127WYGR127W 939 nt6.65□□□□□ -1.34
SSL2Q00578 IME2YJL106W 1938 nt6.65□□□□□ -1.34
SSL2Q00578 YEH1YLL012W 1722 nt6.64□□□□□ -1.35
SSL2Q00578 RET1YOR207C 3450 nt6.64□□□□□ -1.35
SSL2Q00578 FZF1YGL254W 900 nt6.64□□□□□ -1.35
SSL2Q00578 COS6YGR295C 1146 nt6.64□□□□□ -1.35
SSL2Q00578 LDS1YAL018C 978 nt6.64□□□□□ -1.35
SSL2Q00578 CDC11YJR076C 1248 nt6.64□□□□□ -1.35
SSL2Q00578 FSF1YOR271C 984 nt6.64□□□□□ -1.35
SSL2Q00578 MRPS16YPL013C 366 nt6.64□□□□□ -1.35
SSL2Q00578 MRPL36YBR122C 534 nt6.64□□□□□ -1.35
SSL2Q00578 MKK1YOR231W 1527 nt6.64□□□□□ -1.35
SSL2Q00578 MPA43YNL249C 1629 nt6.64□□□□□ -1.35
SSL2Q00578 MMS21YEL019C 804 nt6.63□□□□□ -1.35
SSL2Q00578 RAD24YER173W 1980 nt6.63□□□□□ -1.35
SSL2Q00578 HXK2YGL253W 1461 nt6.63□□□□□ -1.35
SSL2Q00578 ORM1YGR038W 669 nt6.63□□□□□ -1.35
SSL2Q00578 CWC25YNL245C 540 nt6.63□□□□□ -1.35
SSL2Q00578 YNL285WYNL285W 372 nt6.63□□□□□ -1.35
SSL2Q00578 DEF1YKL054C 2217 nt6.62□□□□□ -1.35
SSL2Q00578 YDR109CYDR109C 2148 nt6.62□□□□□ -1.35
SSL2Q00578 ICL1YER065C 1674 nt6.61□□□□□ -1.35
SSL2Q00578 HSP78YDR258C 2436 nt6.61□□□□□ -1.35
SSL2Q00578 HVG1YER039C 750 nt6.61□□□□□ -1.35
SSL2Q00578 YER148W-AYER148W-A 579 nt6.61□□□□□ -1.35
SSL2Q00578 MDH1YKL085W 1005 nt6.61□□□□□ -1.35
SSL2Q00578 TAF4YMR005W 1167 nt6.61□□□□□ -1.35
SSL2Q00578 COA2YPL189C-A 207 nt6.61□□□□□ -1.35
SSL2Q00578 QDR3YBR043C 2070 nt6.61□□□□□ -1.35
SSL2Q00578 NHA1YLR138W 2958 nt6.6□□□□□ -1.35
SSL2Q00578 DRS1YLL008W 2259 nt6.6□□□□□ -1.35
SSL2Q00578 YDR509WYDR509W 348 nt6.6□□□□□ -1.35
SSL2Q00578 THI4YGR144W 981 nt6.6□□□□□ -1.35
SSL2Q00578 VPS70YJR126C 2436 nt6.6□□□□□ -1.35
SSL2Q00578 ENP1YBR247C 1452 nt6.6□□□□□ -1.35
SSL2Q00578 DIA3YDL024C 1407 nt6.59□□□□□ -1.35
SSL2Q00578 APE3YBR286W 1614 nt6.59□□□□□ -1.35
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms