Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.34■□□□□ 0.85
UBA52P62987 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
UBA52P62987 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
UBA52P62987 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBA52P62987 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
UBA52P62987 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBA52P62987 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBA52P62987 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBA52P62987 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBA52P62987 TSPY13P-201ENST00000338964 914 ntBASIC20.33■□□□□ 0.85
UBA52P62987 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBA52P62987 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.33■□□□□ 0.84
UBA52P62987 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBA52P62987 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
UBA52P62987 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBA52P62987 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBA52P62987 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBA52P62987 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBA52P62987 ECEL1P2-201ENST00000461596 1295 ntBASIC20.32■□□□□ 0.84
UBA52P62987 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.32■□□□□ 0.84
UBA52P62987 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBA52P62987 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.31■□□□□ 0.84
UBA52P62987 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBA52P62987 KRT18P60-201ENST00000312876 1297 ntBASIC20.31■□□□□ 0.84
UBA52P62987 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
UBA52P62987 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.31■□□□□ 0.84
UBA52P62987 AC126177.7-201ENST00000547904 679 ntBASIC20.31■□□□□ 0.84
UBA52P62987 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBA52P62987 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBA52P62987 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBA52P62987 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBA52P62987 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBA52P62987 AC004987.1-201ENST00000428627 508 ntBASIC20.3■□□□□ 0.84
UBA52P62987 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.3■□□□□ 0.84
UBA52P62987 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.3■□□□□ 0.84
UBA52P62987 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBA52P62987 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBA52P62987 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.3■□□□□ 0.84
UBA52P62987 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBA52P62987 AC142381.3-201ENST00000568208 1670 ntBASIC20.29■□□□□ 0.84
UBA52P62987 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
UBA52P62987 ATP5G2P3-201ENST00000429083 425 ntBASIC20.29■□□□□ 0.84
UBA52P62987 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.29■□□□□ 0.84
UBA52P62987 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBA52P62987 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBA52P62987 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.29■□□□□ 0.84
UBA52P62987 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBA52P62987 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBA52P62987 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
UBA52P62987 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBA52P62987 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBA52P62987 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.28■□□□□ 0.84
UBA52P62987 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBA52P62987 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBA52P62987 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
UBA52P62987 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBA52P62987 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBA52P62987 AC068473.5-201ENST00000616428 2072 ntBASIC20.27■□□□□ 0.84
UBA52P62987 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.27■□□□□ 0.84
UBA52P62987 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
UBA52P62987 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
UBA52P62987 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
UBA52P62987 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBA52P62987 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.26■□□□□ 0.83
UBA52P62987 AP002414.2-202ENST00000590929 1450 ntBASIC20.26■□□□□ 0.83
UBA52P62987 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBA52P62987 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.26■□□□□ 0.83
UBA52P62987 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
UBA52P62987 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBA52P62987 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
UBA52P62987 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBA52P62987 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.26■□□□□ 0.83
UBA52P62987 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBA52P62987 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
UBA52P62987 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.25■□□□□ 0.83
UBA52P62987 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBA52P62987 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBA52P62987 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBA52P62987 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.25■□□□□ 0.83
UBA52P62987 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.25■□□□□ 0.83
UBA52P62987 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBA52P62987 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBA52P62987 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.25■□□□□ 0.83
UBA52P62987 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.24■□□□□ 0.83
UBA52P62987 AL139125.2-201ENST00000623134 1869 ntBASIC20.24■□□□□ 0.83
UBA52P62987 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBA52P62987 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
UBA52P62987 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
UBA52P62987 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBA52P62987 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBA52P62987 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
UBA52P62987 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.23■□□□□ 0.83
UBA52P62987 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBA52P62987 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
UBA52P62987 CLDN5-201ENST00000403084 2357 ntBASIC20.23■□□□□ 0.83
UBA52P62987 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
UBA52P62987 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
UBA52P62987 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBA52P62987 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
UBA52P62987 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 407.1 ms