Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CMC4P56277 SPCS2P3-201ENST00000500401 656 ntBASIC17.8■□□□□ 0.44
CMC4P56277 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.8■□□□□ 0.44
CMC4P56277 DUX4L18-201ENST00000553347 1267 ntBASIC17.8■□□□□ 0.44
CMC4P56277 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.8■□□□□ 0.44
CMC4P56277 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CMC4P56277 AC145676.1-201ENST00000514988 2004 ntBASIC17.8■□□□□ 0.44
CMC4P56277 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CMC4P56277 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CMC4P56277 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CMC4P56277 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CMC4P56277 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CMC4P56277 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CMC4P56277 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC17.79■□□□□ 0.44
CMC4P56277 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CMC4P56277 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.79■□□□□ 0.44
CMC4P56277 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CMC4P56277 AC019171.1-201ENST00000601251 1056 ntBASIC17.79■□□□□ 0.44
CMC4P56277 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CMC4P56277 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CMC4P56277 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CMC4P56277 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CMC4P56277 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMC4P56277 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.78■□□□□ 0.44
CMC4P56277 AL033527.3-201ENST00000566366 1196 ntBASIC17.78■□□□□ 0.44
CMC4P56277 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.78■□□□□ 0.44
CMC4P56277 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMC4P56277 DUSP8P4-201ENST00000399538 1761 ntBASIC17.78■□□□□ 0.44
CMC4P56277 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMC4P56277 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMC4P56277 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CMC4P56277 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CMC4P56277 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CMC4P56277 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CMC4P56277 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
CMC4P56277 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CMC4P56277 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.77■□□□□ 0.44
CMC4P56277 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.77■□□□□ 0.44
CMC4P56277 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
CMC4P56277 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CMC4P56277 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CMC4P56277 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CMC4P56277 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CMC4P56277 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CMC4P56277 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CMC4P56277 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.76■□□□□ 0.43
CMC4P56277 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CMC4P56277 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC17.76■□□□□ 0.43
CMC4P56277 AC022616.5-201ENST00000518796 181 ntBASIC17.76■□□□□ 0.43
CMC4P56277 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.76■□□□□ 0.43
CMC4P56277 AC097639.1-201ENST00000565519 1891 ntBASIC17.75■□□□□ 0.43
CMC4P56277 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CMC4P56277 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CMC4P56277 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CMC4P56277 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.75■□□□□ 0.43
CMC4P56277 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CMC4P56277 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CMC4P56277 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.75■□□□□ 0.43
CMC4P56277 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CMC4P56277 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CMC4P56277 AC091060.1-201ENST00000623524 1766 ntBASIC17.74■□□□□ 0.43
CMC4P56277 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CMC4P56277 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CMC4P56277 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CMC4P56277 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CMC4P56277 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CMC4P56277 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CMC4P56277 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMC4P56277 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMC4P56277 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMC4P56277 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMC4P56277 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.73■□□□□ 0.43
CMC4P56277 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMC4P56277 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.72■□□□□ 0.43
CMC4P56277 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
CMC4P56277 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CMC4P56277 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CMC4P56277 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CMC4P56277 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CMC4P56277 AL592295.1-201ENST00000400984 884 ntBASIC17.72■□□□□ 0.43
CMC4P56277 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.72■□□□□ 0.43
CMC4P56277 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CMC4P56277 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.72■□□□□ 0.43
CMC4P56277 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CMC4P56277 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMC4P56277 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMC4P56277 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMC4P56277 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMC4P56277 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMC4P56277 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMC4P56277 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CMC4P56277 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.71■□□□□ 0.43
CMC4P56277 LONRF2P2-201ENST00000439212 571 ntBASIC17.71■□□□□ 0.43
CMC4P56277 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CMC4P56277 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.71■□□□□ 0.43
CMC4P56277 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CMC4P56277 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CMC4P56277 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMC4P56277 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.7■□□□□ 0.42
CMC4P56277 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms