Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CEACAM3P40198 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CEACAM3P40198 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CEACAM3P40198 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.41■□□□□ 0.7
CEACAM3P40198 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.41■□□□□ 0.7
CEACAM3P40198 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CEACAM3P40198 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CEACAM3P40198 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
CEACAM3P40198 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CEACAM3P40198 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CEACAM3P40198 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CEACAM3P40198 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.4■□□□□ 0.7
CEACAM3P40198 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.4■□□□□ 0.7
CEACAM3P40198 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CEACAM3P40198 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CEACAM3P40198 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CEACAM3P40198 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
CEACAM3P40198 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CEACAM3P40198 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.39■□□□□ 0.7
CEACAM3P40198 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CEACAM3P40198 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CEACAM3P40198 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CEACAM3P40198 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CEACAM3P40198 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.39■□□□□ 0.69
CEACAM3P40198 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CEACAM3P40198 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CEACAM3P40198 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CEACAM3P40198 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.38■□□□□ 0.69
CEACAM3P40198 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CEACAM3P40198 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CEACAM3P40198 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.37■□□□□ 0.69
CEACAM3P40198 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CEACAM3P40198 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CEACAM3P40198 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.37■□□□□ 0.69
CEACAM3P40198 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CEACAM3P40198 TSPY13P-201ENST00000338964 914 ntBASIC19.37■□□□□ 0.69
CEACAM3P40198 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CEACAM3P40198 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.37■□□□□ 0.69
CEACAM3P40198 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CEACAM3P40198 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CEACAM3P40198 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC19.36■□□□□ 0.69
CEACAM3P40198 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CEACAM3P40198 ATP5G2P3-201ENST00000429083 425 ntBASIC19.36■□□□□ 0.69
CEACAM3P40198 SPCS2P3-201ENST00000500401 656 ntBASIC19.36■□□□□ 0.69
CEACAM3P40198 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CEACAM3P40198 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CEACAM3P40198 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CEACAM3P40198 AC097639.1-201ENST00000565519 1891 ntBASIC19.35■□□□□ 0.69
CEACAM3P40198 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CEACAM3P40198 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CEACAM3P40198 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CEACAM3P40198 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CEACAM3P40198 AC139795.1-202ENST00000500444 432 ntBASIC19.35■□□□□ 0.69
CEACAM3P40198 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CEACAM3P40198 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CEACAM3P40198 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CEACAM3P40198 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CEACAM3P40198 AC096887.2-201ENST00000623443 1957 ntBASIC19.35■□□□□ 0.69
CEACAM3P40198 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CEACAM3P40198 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CEACAM3P40198 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CEACAM3P40198 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.34■□□□□ 0.69
CEACAM3P40198 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CEACAM3P40198 RPS2P7-201ENST00000447334 885 ntBASIC19.34■□□□□ 0.69
CEACAM3P40198 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CEACAM3P40198 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CEACAM3P40198 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
CEACAM3P40198 AC004987.1-201ENST00000428627 508 ntBASIC19.33■□□□□ 0.68
CEACAM3P40198 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.33■□□□□ 0.68
CEACAM3P40198 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.33■□□□□ 0.68
CEACAM3P40198 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CEACAM3P40198 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CEACAM3P40198 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CEACAM3P40198 DUX4L18-201ENST00000553347 1267 ntBASIC19.32■□□□□ 0.68
CEACAM3P40198 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.32■□□□□ 0.68
CEACAM3P40198 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CEACAM3P40198 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CEACAM3P40198 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CEACAM3P40198 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.31■□□□□ 0.68
CEACAM3P40198 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.31■□□□□ 0.68
CEACAM3P40198 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.31■□□□□ 0.68
CEACAM3P40198 AC087393.1-201ENST00000582896 145 ntBASIC19.31■□□□□ 0.68
CEACAM3P40198 BHLHE23-202ENST00000612929 1109 ntBASIC19.31■□□□□ 0.68
CEACAM3P40198 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CEACAM3P40198 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CEACAM3P40198 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
CEACAM3P40198 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CEACAM3P40198 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CEACAM3P40198 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.3■□□□□ 0.68
CEACAM3P40198 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CEACAM3P40198 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CEACAM3P40198 AC074183.2-201ENST00000623112 922 ntBASIC19.3■□□□□ 0.68
CEACAM3P40198 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.3■□□□□ 0.68
CEACAM3P40198 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CEACAM3P40198 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.3■□□□□ 0.68
CEACAM3P40198 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
CEACAM3P40198 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CEACAM3P40198 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CEACAM3P40198 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CEACAM3P40198 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms