Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNCAP37840 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNCAP37840 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SNCAP37840 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNCAP37840 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNCAP37840 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNCAP37840 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNCAP37840 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SNCAP37840 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNCAP37840 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SNCAP37840 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNCAP37840 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SNCAP37840 AC022211.4-201ENST00000625094 2161 ntBASIC19.43■□□□□ 0.7
SNCAP37840 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SNCAP37840 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNCAP37840 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNCAP37840 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNCAP37840 AC008813.1-201ENST00000536597 885 ntBASIC19.43■□□□□ 0.7
SNCAP37840 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.43■□□□□ 0.7
SNCAP37840 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SNCAP37840 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNCAP37840 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNCAP37840 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.42■□□□□ 0.7
SNCAP37840 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNCAP37840 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNCAP37840 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNCAP37840 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNCAP37840 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNCAP37840 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNCAP37840 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNCAP37840 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNCAP37840 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNCAP37840 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.41■□□□□ 0.7
SNCAP37840 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNCAP37840 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SNCAP37840 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNCAP37840 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNCAP37840 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.41■□□□□ 0.7
SNCAP37840 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNCAP37840 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNCAP37840 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNCAP37840 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNCAP37840 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNCAP37840 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.4■□□□□ 0.7
SNCAP37840 DUX4L13-201ENST00000554103 1267 ntBASIC19.4■□□□□ 0.7
SNCAP37840 DUX4L15-201ENST00000611059 1267 ntBASIC19.4■□□□□ 0.7
SNCAP37840 DUX4L23-201ENST00000615195 1269 ntBASIC19.4■□□□□ 0.7
SNCAP37840 DUX4L24-201ENST00000617576 1269 ntBASIC19.4■□□□□ 0.7
SNCAP37840 DUX4L22-201ENST00000618238 1269 ntBASIC19.4■□□□□ 0.7
SNCAP37840 DUX4L20-201ENST00000619712 1269 ntBASIC19.4■□□□□ 0.7
SNCAP37840 DUX4L21-201ENST00000622058 1269 ntBASIC19.4■□□□□ 0.7
SNCAP37840 DUX4L10-201ENST00000622460 1267 ntBASIC19.4■□□□□ 0.7
SNCAP37840 DUX4L25-201ENST00000624915 1269 ntBASIC19.4■□□□□ 0.7
SNCAP37840 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SNCAP37840 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SNCAP37840 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNCAP37840 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNCAP37840 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNCAP37840 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.4■□□□□ 0.7
SNCAP37840 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNCAP37840 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
SNCAP37840 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNCAP37840 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNCAP37840 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNCAP37840 RPS2P35-201ENST00000443417 897 ntBASIC19.38■□□□□ 0.69
SNCAP37840 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.38■□□□□ 0.69
SNCAP37840 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNCAP37840 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.38■□□□□ 0.69
SNCAP37840 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNCAP37840 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SNCAP37840 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNCAP37840 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNCAP37840 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.37■□□□□ 0.69
SNCAP37840 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNCAP37840 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNCAP37840 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SNCAP37840 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SNCAP37840 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNCAP37840 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNCAP37840 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNCAP37840 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNCAP37840 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNCAP37840 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
SNCAP37840 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNCAP37840 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SNCAP37840 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.36■□□□□ 0.69
SNCAP37840 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.36■□□□□ 0.69
SNCAP37840 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNCAP37840 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNCAP37840 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SNCAP37840 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNCAP37840 AC010501.1-201ENST00000606270 1962 ntBASIC19.35■□□□□ 0.69
SNCAP37840 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNCAP37840 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNCAP37840 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SNCAP37840 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.35■□□□□ 0.69
SNCAP37840 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
SNCAP37840 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SNCAP37840 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.35■□□□□ 0.69
SNCAP37840 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms