Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 PKD1P6-201ENST00000343738 4769 ntBASIC21.28■■□□□ 1
SOX6P35712 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SOX6P35712 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SOX6P35712 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.27■■□□□ 1
SOX6P35712 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SOX6P35712 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.27■■□□□ 1
SOX6P35712 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SOX6P35712 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SOX6P35712 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SOX6P35712 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SOX6P35712 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SOX6P35712 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.26■□□□□ 0.99
SOX6P35712 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SOX6P35712 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.26■□□□□ 0.99
SOX6P35712 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
SOX6P35712 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SOX6P35712 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SOX6P35712 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SOX6P35712 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SOX6P35712 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SOX6P35712 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SOX6P35712 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SOX6P35712 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SOX6P35712 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SOX6P35712 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SOX6P35712 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SOX6P35712 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SOX6P35712 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SOX6P35712 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SOX6P35712 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SOX6P35712 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.23■□□□□ 0.99
SOX6P35712 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SOX6P35712 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SOX6P35712 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.23■□□□□ 0.99
SOX6P35712 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SOX6P35712 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
SOX6P35712 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SOX6P35712 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.22■□□□□ 0.99
SOX6P35712 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.22■□□□□ 0.99
SOX6P35712 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.22■□□□□ 0.99
SOX6P35712 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SOX6P35712 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.22■□□□□ 0.99
SOX6P35712 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
SOX6P35712 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SOX6P35712 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SOX6P35712 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX6P35712 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.21■□□□□ 0.99
SOX6P35712 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX6P35712 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX6P35712 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX6P35712 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX6P35712 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.21■□□□□ 0.99
SOX6P35712 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SOX6P35712 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.21■□□□□ 0.99
SOX6P35712 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SOX6P35712 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SOX6P35712 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SOX6P35712 MIR762-201ENST00000390236 83 ntBASIC21.2■□□□□ 0.98
SOX6P35712 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.2■□□□□ 0.98
SOX6P35712 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SOX6P35712 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SOX6P35712 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SOX6P35712 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SOX6P35712 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SOX6P35712 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SOX6P35712 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SOX6P35712 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SOX6P35712 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOX6P35712 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOX6P35712 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOX6P35712 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SOX6P35712 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SOX6P35712 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SOX6P35712 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SOX6P35712 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SOX6P35712 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.17■□□□□ 0.98
SOX6P35712 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SOX6P35712 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.17■□□□□ 0.98
SOX6P35712 AC141586.4-201ENST00000624558 1573 ntBASIC21.17■□□□□ 0.98
SOX6P35712 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.17■□□□□ 0.98
SOX6P35712 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SOX6P35712 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SOX6P35712 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SOX6P35712 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SOX6P35712 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SOX6P35712 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SOX6P35712 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.16■□□□□ 0.98
SOX6P35712 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SOX6P35712 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SOX6P35712 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SOX6P35712 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SOX6P35712 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SOX6P35712 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SOX6P35712 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
SOX6P35712 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.16■□□□□ 0.98
SOX6P35712 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.15■□□□□ 0.98
SOX6P35712 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SOX6P35712 LINC00273-201ENST00000539813 1452 ntBASIC21.15■□□□□ 0.98
SOX6P35712 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SOX6P35712 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms