Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
GDF1P27539 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
GDF1P27539 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.71■■□□□ 1.07
GDF1P27539 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.71■■□□□ 1.07
GDF1P27539 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
GDF1P27539 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.7■■□□□ 1.06
GDF1P27539 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
GDF1P27539 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
GDF1P27539 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.69■■□□□ 1.06
GDF1P27539 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.69■■□□□ 1.06
GDF1P27539 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
GDF1P27539 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GDF1P27539 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GDF1P27539 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
GDF1P27539 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GDF1P27539 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
GDF1P27539 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
GDF1P27539 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
GDF1P27539 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.68■■□□□ 1.06
GDF1P27539 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
GDF1P27539 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GDF1P27539 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GDF1P27539 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GDF1P27539 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
GDF1P27539 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
GDF1P27539 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.67■■□□□ 1.06
GDF1P27539 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.67■■□□□ 1.06
GDF1P27539 AL451085.2-201ENST00000605085 799 ntBASIC21.67■■□□□ 1.06
GDF1P27539 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
GDF1P27539 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
GDF1P27539 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
GDF1P27539 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.67■■□□□ 1.06
GDF1P27539 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
GDF1P27539 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
GDF1P27539 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
GDF1P27539 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
GDF1P27539 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GDF1P27539 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.66■■□□□ 1.06
GDF1P27539 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
GDF1P27539 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
GDF1P27539 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
GDF1P27539 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.66■■□□□ 1.06
GDF1P27539 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.65■■□□□ 1.06
GDF1P27539 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GDF1P27539 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
GDF1P27539 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.65■■□□□ 1.06
GDF1P27539 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.65■■□□□ 1.06
GDF1P27539 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
GDF1P27539 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.65■■□□□ 1.06
GDF1P27539 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.65■■□□□ 1.06
GDF1P27539 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.65■■□□□ 1.06
GDF1P27539 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
GDF1P27539 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
GDF1P27539 ERN1-208ENST00000606895 2068 ntBASIC21.64■■□□□ 1.05
GDF1P27539 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GDF1P27539 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GDF1P27539 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
GDF1P27539 AC103724.3-201ENST00000564481 992 ntBASIC21.64■■□□□ 1.05
GDF1P27539 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GDF1P27539 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
GDF1P27539 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GDF1P27539 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
GDF1P27539 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
GDF1P27539 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GDF1P27539 AL031848.2-201ENST00000607670 837 ntBASIC21.63■■□□□ 1.05
GDF1P27539 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GDF1P27539 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GDF1P27539 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GDF1P27539 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.62■■□□□ 1.05
GDF1P27539 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GDF1P27539 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.62■■□□□ 1.05
GDF1P27539 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
GDF1P27539 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.62■■□□□ 1.05
GDF1P27539 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
GDF1P27539 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
GDF1P27539 AC022616.5-201ENST00000518796 181 ntBASIC21.61■■□□□ 1.05
GDF1P27539 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.61■■□□□ 1.05
GDF1P27539 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GDF1P27539 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.6■■□□□ 1.05
GDF1P27539 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GDF1P27539 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
GDF1P27539 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GDF1P27539 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.6■■□□□ 1.05
GDF1P27539 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GDF1P27539 AL035685.1-201ENST00000636663 812 ntBASIC21.6■■□□□ 1.05
GDF1P27539 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
GDF1P27539 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GDF1P27539 AC092803.2-201ENST00000564287 1899 ntBASIC21.6■■□□□ 1.05
GDF1P27539 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
GDF1P27539 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.59■■□□□ 1.05
GDF1P27539 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.59■■□□□ 1.05
GDF1P27539 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
GDF1P27539 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
GDF1P27539 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.58■■□□□ 1.04
GDF1P27539 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
GDF1P27539 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
GDF1P27539 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.58■■□□□ 1.04
GDF1P27539 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.57■■□□□ 1.04
GDF1P27539 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
GDF1P27539 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms