Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
THBS1P07996 AC093536.1-201ENST00000569153 554 ntBASIC22■■□□□ 1.11
THBS1P07996 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22■■□□□ 1.11
THBS1P07996 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
THBS1P07996 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22■■□□□ 1.11
THBS1P07996 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
THBS1P07996 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
THBS1P07996 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
THBS1P07996 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.99■■□□□ 1.11
THBS1P07996 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
THBS1P07996 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
THBS1P07996 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
THBS1P07996 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
THBS1P07996 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
THBS1P07996 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.98■■□□□ 1.11
THBS1P07996 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.98■■□□□ 1.11
THBS1P07996 GPX1-201ENST00000419349 1106 ntBASIC21.98■■□□□ 1.11
THBS1P07996 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
THBS1P07996 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.98■■□□□ 1.11
THBS1P07996 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.98■■□□□ 1.11
THBS1P07996 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
THBS1P07996 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
THBS1P07996 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
THBS1P07996 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.97■■□□□ 1.11
THBS1P07996 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
THBS1P07996 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
THBS1P07996 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
THBS1P07996 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
THBS1P07996 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
THBS1P07996 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
THBS1P07996 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
THBS1P07996 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
THBS1P07996 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
THBS1P07996 AC138932.3-201ENST00000567634 1902 ntBASIC21.96■■□□□ 1.11
THBS1P07996 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.96■■□□□ 1.11
THBS1P07996 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.96■■□□□ 1.11
THBS1P07996 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
THBS1P07996 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
THBS1P07996 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
THBS1P07996 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
THBS1P07996 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
THBS1P07996 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
THBS1P07996 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.95■■□□□ 1.1
THBS1P07996 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
THBS1P07996 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
THBS1P07996 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.94■■□□□ 1.1
THBS1P07996 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
THBS1P07996 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
THBS1P07996 SLC6A10P-202ENST00000431994 2058 ntBASIC21.93■■□□□ 1.1
THBS1P07996 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
THBS1P07996 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
THBS1P07996 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
THBS1P07996 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
THBS1P07996 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
THBS1P07996 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.92■■□□□ 1.1
THBS1P07996 RARRES2P2-201ENST00000394842 485 ntBASIC21.92■■□□□ 1.1
THBS1P07996 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
THBS1P07996 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.92■■□□□ 1.1
THBS1P07996 RAP2CP1-202ENST00000605179 643 ntBASIC21.92■■□□□ 1.1
THBS1P07996 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
THBS1P07996 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
THBS1P07996 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
THBS1P07996 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
THBS1P07996 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.91■■□□□ 1.1
THBS1P07996 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
THBS1P07996 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
THBS1P07996 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
THBS1P07996 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
THBS1P07996 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
THBS1P07996 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.9■■□□□ 1.1
THBS1P07996 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
THBS1P07996 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
THBS1P07996 AP003733.4-201ENST00000623785 1697 ntBASIC21.9■■□□□ 1.1
THBS1P07996 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
THBS1P07996 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
THBS1P07996 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
THBS1P07996 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
THBS1P07996 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
THBS1P07996 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
THBS1P07996 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
THBS1P07996 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
THBS1P07996 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
THBS1P07996 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
THBS1P07996 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
THBS1P07996 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
THBS1P07996 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.88■■□□□ 1.09
THBS1P07996 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.88■■□□□ 1.09
THBS1P07996 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
THBS1P07996 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
THBS1P07996 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
THBS1P07996 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
THBS1P07996 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
THBS1P07996 AC026202.3-201ENST00000600805 1127 ntBASIC21.88■■□□□ 1.09
THBS1P07996 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
THBS1P07996 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
THBS1P07996 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
THBS1P07996 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.88■■□□□ 1.09
THBS1P07996 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
THBS1P07996 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
THBS1P07996 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms