Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.33
CAPN1P07384 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CAPN1P07384 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.38■■□□□ 1.33
CAPN1P07384 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
CAPN1P07384 AC133552.2-201ENST00000619106 1032 ntBASIC23.38■■□□□ 1.33
CAPN1P07384 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.38■■□□□ 1.33
CAPN1P07384 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CAPN1P07384 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.37■■□□□ 1.33
CAPN1P07384 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
CAPN1P07384 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CAPN1P07384 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.37■■□□□ 1.33
CAPN1P07384 AL592293.1-201ENST00000502889 1188 ntBASIC23.37■■□□□ 1.33
CAPN1P07384 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CAPN1P07384 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CAPN1P07384 AC026202.3-201ENST00000600805 1127 ntBASIC23.37■■□□□ 1.33
CAPN1P07384 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CAPN1P07384 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CAPN1P07384 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
CAPN1P07384 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CAPN1P07384 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CAPN1P07384 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
CAPN1P07384 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CAPN1P07384 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.36■■□□□ 1.33
CAPN1P07384 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CAPN1P07384 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CAPN1P07384 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CAPN1P07384 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CAPN1P07384 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
CAPN1P07384 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.35■■□□□ 1.33
CAPN1P07384 AC129492.7-201ENST00000622992 756 ntBASIC23.35■■□□□ 1.33
CAPN1P07384 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
CAPN1P07384 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CAPN1P07384 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.34■■□□□ 1.33
CAPN1P07384 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CAPN1P07384 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CAPN1P07384 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CAPN1P07384 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CAPN1P07384 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.33■■□□□ 1.33
CAPN1P07384 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CAPN1P07384 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CAPN1P07384 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CAPN1P07384 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.33■■□□□ 1.33
CAPN1P07384 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CAPN1P07384 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CAPN1P07384 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.33■■□□□ 1.33
CAPN1P07384 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CAPN1P07384 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.33■■□□□ 1.33
CAPN1P07384 RP9P-202ENST00000450133 1212 ntBASIC23.33■■□□□ 1.33
CAPN1P07384 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
CAPN1P07384 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.32■■□□□ 1.32
CAPN1P07384 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
CAPN1P07384 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
CAPN1P07384 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CAPN1P07384 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
CAPN1P07384 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CAPN1P07384 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.32■■□□□ 1.32
CAPN1P07384 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CAPN1P07384 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CAPN1P07384 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CAPN1P07384 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.31■■□□□ 1.32
CAPN1P07384 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CAPN1P07384 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CAPN1P07384 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CAPN1P07384 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CAPN1P07384 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC23.3■■□□□ 1.32
CAPN1P07384 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.3■■□□□ 1.32
CAPN1P07384 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CAPN1P07384 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CAPN1P07384 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.3■■□□□ 1.32
CAPN1P07384 AC093536.1-201ENST00000569153 554 ntBASIC23.3■■□□□ 1.32
CAPN1P07384 RAP2CP1-202ENST00000605179 643 ntBASIC23.3■■□□□ 1.32
CAPN1P07384 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CAPN1P07384 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CAPN1P07384 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.3■■□□□ 1.32
CAPN1P07384 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CAPN1P07384 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.3■■□□□ 1.32
CAPN1P07384 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.29■■□□□ 1.32
CAPN1P07384 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
CAPN1P07384 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.29■■□□□ 1.32
CAPN1P07384 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CAPN1P07384 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CAPN1P07384 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CAPN1P07384 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CAPN1P07384 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CAPN1P07384 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CAPN1P07384 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.28■■□□□ 1.32
CAPN1P07384 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CAPN1P07384 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CAPN1P07384 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CAPN1P07384 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.28■■□□□ 1.32
CAPN1P07384 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.28■■□□□ 1.32
CAPN1P07384 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CAPN1P07384 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
CAPN1P07384 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CAPN1P07384 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CAPN1P07384 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CAPN1P07384 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.27■■□□□ 1.32
CAPN1P07384 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.27■■□□□ 1.32
CAPN1P07384 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CAPN1P07384 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms