Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
PCCBP05166 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCCBP05166 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
PCCBP05166 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCCBP05166 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCCBP05166 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCCBP05166 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.75■■□□□ 1.39
PCCBP05166 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
PCCBP05166 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.75■■□□□ 1.39
PCCBP05166 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCCBP05166 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCCBP05166 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
PCCBP05166 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PCCBP05166 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
PCCBP05166 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.74■■□□□ 1.39
PCCBP05166 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCCBP05166 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
PCCBP05166 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.74■■□□□ 1.39
PCCBP05166 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.74■■□□□ 1.39
PCCBP05166 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCCBP05166 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCCBP05166 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.74■■□□□ 1.39
PCCBP05166 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.73■■□□□ 1.39
PCCBP05166 AC103724.3-201ENST00000564481 992 ntBASIC23.73■■□□□ 1.39
PCCBP05166 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCCBP05166 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCCBP05166 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.72■■□□□ 1.39
PCCBP05166 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCCBP05166 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCCBP05166 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCCBP05166 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCCBP05166 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.72■■□□□ 1.39
PCCBP05166 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCCBP05166 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCCBP05166 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCCBP05166 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCCBP05166 ERN1-208ENST00000606895 2068 ntBASIC23.72■■□□□ 1.39
PCCBP05166 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.71■■□□□ 1.39
PCCBP05166 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCCBP05166 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCCBP05166 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC23.71■■□□□ 1.39
PCCBP05166 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PCCBP05166 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.71■■□□□ 1.39
PCCBP05166 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCCBP05166 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.71■■□□□ 1.39
PCCBP05166 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.71■■□□□ 1.39
PCCBP05166 AL035685.1-201ENST00000636663 812 ntBASIC23.71■■□□□ 1.39
PCCBP05166 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PCCBP05166 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
PCCBP05166 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
PCCBP05166 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCCBP05166 AL031848.2-201ENST00000607670 837 ntBASIC23.7■■□□□ 1.38
PCCBP05166 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCCBP05166 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCCBP05166 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCCBP05166 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.69■■□□□ 1.38
PCCBP05166 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCCBP05166 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCCBP05166 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCCBP05166 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.69■■□□□ 1.38
PCCBP05166 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCCBP05166 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.68■■□□□ 1.38
PCCBP05166 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
PCCBP05166 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
PCCBP05166 AC009299.2-201ENST00000482477 511 ntBASIC23.67■■□□□ 1.38
PCCBP05166 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.67■■□□□ 1.38
PCCBP05166 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCCBP05166 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
PCCBP05166 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.67■■□□□ 1.38
PCCBP05166 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCCBP05166 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCCBP05166 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.66■■□□□ 1.38
PCCBP05166 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCCBP05166 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCCBP05166 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
PCCBP05166 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCCBP05166 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
PCCBP05166 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCCBP05166 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCCBP05166 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.64■■□□□ 1.38
PCCBP05166 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCCBP05166 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.64■■□□□ 1.37
PCCBP05166 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.64■■□□□ 1.37
PCCBP05166 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.64■■□□□ 1.37
PCCBP05166 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCCBP05166 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCCBP05166 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCCBP05166 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCCBP05166 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCCBP05166 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCCBP05166 AC096887.2-201ENST00000623443 1957 ntBASIC23.63■■□□□ 1.37
PCCBP05166 AC092803.2-201ENST00000564287 1899 ntBASIC23.62■■□□□ 1.37
PCCBP05166 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCCBP05166 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCCBP05166 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCCBP05166 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.62■■□□□ 1.37
PCCBP05166 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.62■■□□□ 1.37
PCCBP05166 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.62■■□□□ 1.37
PCCBP05166 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCCBP05166 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms