Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.71■■□□□ 1.07
IDH3BO43837 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
IDH3BO43837 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
IDH3BO43837 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.7■■□□□ 1.07
IDH3BO43837 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
IDH3BO43837 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
IDH3BO43837 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
IDH3BO43837 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
IDH3BO43837 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
IDH3BO43837 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
IDH3BO43837 CR559946.2-201ENST00000623684 991 ntBASIC21.7■■□□□ 1.06
IDH3BO43837 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
IDH3BO43837 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
IDH3BO43837 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
IDH3BO43837 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
IDH3BO43837 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.69■■□□□ 1.06
IDH3BO43837 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
IDH3BO43837 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.69■■□□□ 1.06
IDH3BO43837 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
IDH3BO43837 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.69■■□□□ 1.06
IDH3BO43837 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.69■■□□□ 1.06
IDH3BO43837 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
IDH3BO43837 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.69■■□□□ 1.06
IDH3BO43837 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
IDH3BO43837 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
IDH3BO43837 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
IDH3BO43837 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
IDH3BO43837 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
IDH3BO43837 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.68■■□□□ 1.06
IDH3BO43837 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
IDH3BO43837 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.68■■□□□ 1.06
IDH3BO43837 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
IDH3BO43837 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
IDH3BO43837 CLDN5-201ENST00000403084 2357 ntBASIC21.67■■□□□ 1.06
IDH3BO43837 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
IDH3BO43837 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
IDH3BO43837 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
IDH3BO43837 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
IDH3BO43837 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
IDH3BO43837 ABHD17AP4-201ENST00000411545 909 ntBASIC21.67■■□□□ 1.06
IDH3BO43837 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.67■■□□□ 1.06
IDH3BO43837 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.67■■□□□ 1.06
IDH3BO43837 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
IDH3BO43837 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
IDH3BO43837 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
IDH3BO43837 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
IDH3BO43837 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.66■■□□□ 1.06
IDH3BO43837 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
IDH3BO43837 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
IDH3BO43837 MIR3648-2-201ENST00000581792 180 ntBASIC21.66■■□□□ 1.06
IDH3BO43837 MIR3648-1-201ENST00000615959 180 ntBASIC21.66■■□□□ 1.06
IDH3BO43837 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
IDH3BO43837 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
IDH3BO43837 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
IDH3BO43837 AC142381.3-201ENST00000568208 1670 ntBASIC21.66■■□□□ 1.06
IDH3BO43837 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
IDH3BO43837 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
IDH3BO43837 AC096887.2-201ENST00000623443 1957 ntBASIC21.65■■□□□ 1.06
IDH3BO43837 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
IDH3BO43837 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
IDH3BO43837 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
IDH3BO43837 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
IDH3BO43837 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
IDH3BO43837 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
IDH3BO43837 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
IDH3BO43837 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.64■■□□□ 1.05
IDH3BO43837 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.64■■□□□ 1.05
IDH3BO43837 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
IDH3BO43837 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
IDH3BO43837 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
IDH3BO43837 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.63■■□□□ 1.05
IDH3BO43837 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
IDH3BO43837 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
IDH3BO43837 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
IDH3BO43837 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
IDH3BO43837 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
IDH3BO43837 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
IDH3BO43837 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
IDH3BO43837 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
IDH3BO43837 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.62■■□□□ 1.05
IDH3BO43837 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.62■■□□□ 1.05
IDH3BO43837 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.62■■□□□ 1.05
IDH3BO43837 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
IDH3BO43837 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
IDH3BO43837 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
IDH3BO43837 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
IDH3BO43837 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
IDH3BO43837 AC079834.2-201ENST00000609776 1949 ntBASIC21.61■■□□□ 1.05
IDH3BO43837 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
IDH3BO43837 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
IDH3BO43837 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
IDH3BO43837 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
IDH3BO43837 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
IDH3BO43837 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
IDH3BO43837 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
IDH3BO43837 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
IDH3BO43837 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
IDH3BO43837 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
IDH3BO43837 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.57■■□□□ 1.04
IDH3BO43837 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms