Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.69■□□□□ 0.9
XRCC2O43543 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
XRCC2O43543 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.69■□□□□ 0.9
XRCC2O43543 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
XRCC2O43543 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
XRCC2O43543 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
XRCC2O43543 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
XRCC2O43543 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
XRCC2O43543 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XRCC2O43543 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
XRCC2O43543 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRCC2O43543 RNF126P1-201ENST00000567452 1320 ntBASIC20.68■□□□□ 0.9
XRCC2O43543 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRCC2O43543 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.68■□□□□ 0.9
XRCC2O43543 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.68■□□□□ 0.9
XRCC2O43543 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRCC2O43543 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRCC2O43543 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.68■□□□□ 0.9
XRCC2O43543 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
XRCC2O43543 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
XRCC2O43543 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
XRCC2O43543 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
XRCC2O43543 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
XRCC2O43543 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
XRCC2O43543 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
XRCC2O43543 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
XRCC2O43543 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
XRCC2O43543 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
XRCC2O43543 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
XRCC2O43543 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
XRCC2O43543 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.65■□□□□ 0.9
XRCC2O43543 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
XRCC2O43543 RAP2CP1-202ENST00000605179 643 ntBASIC20.65■□□□□ 0.9
XRCC2O43543 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.64■□□□□ 0.9
XRCC2O43543 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
XRCC2O43543 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
XRCC2O43543 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.64■□□□□ 0.89
XRCC2O43543 AC026202.3-201ENST00000600805 1127 ntBASIC20.64■□□□□ 0.89
XRCC2O43543 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
XRCC2O43543 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
XRCC2O43543 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
XRCC2O43543 KRT18P10-201ENST00000388836 1287 ntBASIC20.63■□□□□ 0.89
XRCC2O43543 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
XRCC2O43543 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
XRCC2O43543 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
XRCC2O43543 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
XRCC2O43543 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
XRCC2O43543 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
XRCC2O43543 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.61■□□□□ 0.89
XRCC2O43543 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
XRCC2O43543 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
XRCC2O43543 AC142381.3-201ENST00000568208 1670 ntBASIC20.61■□□□□ 0.89
XRCC2O43543 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
XRCC2O43543 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.61■□□□□ 0.89
XRCC2O43543 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
XRCC2O43543 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
XRCC2O43543 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
XRCC2O43543 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.61■□□□□ 0.89
XRCC2O43543 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
XRCC2O43543 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
XRCC2O43543 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
XRCC2O43543 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
XRCC2O43543 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
XRCC2O43543 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
XRCC2O43543 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
XRCC2O43543 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
XRCC2O43543 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
XRCC2O43543 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
XRCC2O43543 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
XRCC2O43543 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
XRCC2O43543 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
XRCC2O43543 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
XRCC2O43543 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
XRCC2O43543 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
XRCC2O43543 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
XRCC2O43543 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
XRCC2O43543 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
XRCC2O43543 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
XRCC2O43543 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
XRCC2O43543 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.58■□□□□ 0.88
XRCC2O43543 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
XRCC2O43543 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.57■□□□□ 0.88
XRCC2O43543 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
XRCC2O43543 AC009831.1-201ENST00000580420 1582 ntBASIC20.57■□□□□ 0.88
XRCC2O43543 AC133552.2-201ENST00000619106 1032 ntBASIC20.57■□□□□ 0.88
XRCC2O43543 AC022211.4-201ENST00000625094 2161 ntBASIC20.57■□□□□ 0.88
XRCC2O43543 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
XRCC2O43543 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
XRCC2O43543 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.57■□□□□ 0.88
XRCC2O43543 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
XRCC2O43543 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.56■□□□□ 0.88
XRCC2O43543 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
XRCC2O43543 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
XRCC2O43543 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
XRCC2O43543 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
XRCC2O43543 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
XRCC2O43543 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
XRCC2O43543 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
XRCC2O43543 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
XRCC2O43543 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms