Protein–RNA interactions for Protein: O00400

SLC33A1, Acetyl-coenzyme A transporter 1, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC33A1O00400 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC33A1O00400 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC33A1O00400 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC33A1O00400 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC33A1O00400 AC092296.2-201ENST00000589470 999 ntBASIC20.22■□□□□ 0.83
SLC33A1O00400 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC33A1O00400 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC33A1O00400 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
SLC33A1O00400 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
SLC33A1O00400 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SLC33A1O00400 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC33A1O00400 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC33A1O00400 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC33A1O00400 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.21■□□□□ 0.83
SLC33A1O00400 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC33A1O00400 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC33A1O00400 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC33A1O00400 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SLC33A1O00400 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.2■□□□□ 0.82
SLC33A1O00400 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SLC33A1O00400 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
SLC33A1O00400 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC33A1O00400 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.19■□□□□ 0.82
SLC33A1O00400 AC022413.1-201ENST00000624602 984 ntBASIC20.19■□□□□ 0.82
SLC33A1O00400 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.19■□□□□ 0.82
SLC33A1O00400 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC33A1O00400 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SLC33A1O00400 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SLC33A1O00400 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.18■□□□□ 0.82
SLC33A1O00400 SMPD5-203ENST00000639008 1464 ntBASIC20.18■□□□□ 0.82
SLC33A1O00400 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC33A1O00400 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC33A1O00400 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
SLC33A1O00400 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC33A1O00400 MIR4449-201ENST00000578365 66 ntBASIC20.18■□□□□ 0.82
SLC33A1O00400 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.18■□□□□ 0.82
SLC33A1O00400 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC33A1O00400 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SLC33A1O00400 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SLC33A1O00400 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC33A1O00400 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC33A1O00400 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC33A1O00400 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC33A1O00400 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC33A1O00400 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC33A1O00400 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SLC33A1O00400 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.17■□□□□ 0.82
SLC33A1O00400 MIR3960-201ENST00000583311 91 ntBASIC20.17■□□□□ 0.82
SLC33A1O00400 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC33A1O00400 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SLC33A1O00400 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SLC33A1O00400 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SLC33A1O00400 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC33A1O00400 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC33A1O00400 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC33A1O00400 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC33A1O00400 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.16■□□□□ 0.82
SLC33A1O00400 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.16■□□□□ 0.82
SLC33A1O00400 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
SLC33A1O00400 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC33A1O00400 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC33A1O00400 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.16■□□□□ 0.82
SLC33A1O00400 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC33A1O00400 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SLC33A1O00400 ECEL1P2-201ENST00000461596 1295 ntBASIC20.15■□□□□ 0.82
SLC33A1O00400 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SLC33A1O00400 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SLC33A1O00400 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC33A1O00400 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SLC33A1O00400 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC33A1O00400 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC33A1O00400 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC33A1O00400 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.14■□□□□ 0.81
SLC33A1O00400 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC33A1O00400 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.14■□□□□ 0.81
SLC33A1O00400 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC33A1O00400 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC33A1O00400 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SLC33A1O00400 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC33A1O00400 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC33A1O00400 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC33A1O00400 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC33A1O00400 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC33A1O00400 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC33A1O00400 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.13■□□□□ 0.81
SLC33A1O00400 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC33A1O00400 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SLC33A1O00400 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SLC33A1O00400 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC33A1O00400 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC33A1O00400 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC33A1O00400 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SLC33A1O00400 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SLC33A1O00400 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC33A1O00400 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC33A1O00400 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
SLC33A1O00400 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
SLC33A1O00400 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC33A1O00400 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC33A1O00400 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms