Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00473A8K010 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LINC00473A8K010 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.45■□□□□ 0.7
LINC00473A8K010 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC00473A8K010 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.45■□□□□ 0.7
LINC00473A8K010 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.45■□□□□ 0.7
LINC00473A8K010 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC00473A8K010 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC00473A8K010 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00473A8K010 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00473A8K010 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00473A8K010 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00473A8K010 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00473A8K010 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00473A8K010 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.44■□□□□ 0.7
LINC00473A8K010 SLC6A10P-202ENST00000431994 2058 ntBASIC19.44■□□□□ 0.7
LINC00473A8K010 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00473A8K010 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00473A8K010 MIR639-201ENST00000384974 98 ntBASIC19.43■□□□□ 0.7
LINC00473A8K010 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.43■□□□□ 0.7
LINC00473A8K010 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LINC00473A8K010 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00473A8K010 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.42■□□□□ 0.7
LINC00473A8K010 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.42■□□□□ 0.7
LINC00473A8K010 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.42■□□□□ 0.7
LINC00473A8K010 AC092296.2-201ENST00000589470 999 ntBASIC19.42■□□□□ 0.7
LINC00473A8K010 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.42■□□□□ 0.7
LINC00473A8K010 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00473A8K010 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00473A8K010 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00473A8K010 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00473A8K010 SMPD5-203ENST00000639008 1464 ntBASIC19.41■□□□□ 0.7
LINC00473A8K010 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
LINC00473A8K010 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LINC00473A8K010 MIR3960-201ENST00000583311 91 ntBASIC19.41■□□□□ 0.7
LINC00473A8K010 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00473A8K010 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00473A8K010 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.41■□□□□ 0.7
LINC00473A8K010 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00473A8K010 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00473A8K010 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00473A8K010 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.4■□□□□ 0.7
LINC00473A8K010 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00473A8K010 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.4■□□□□ 0.7
LINC00473A8K010 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00473A8K010 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.4■□□□□ 0.7
LINC00473A8K010 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LINC00473A8K010 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
LINC00473A8K010 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LINC00473A8K010 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00473A8K010 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00473A8K010 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00473A8K010 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00473A8K010 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LINC00473A8K010 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00473A8K010 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.39■□□□□ 0.69
LINC00473A8K010 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC00473A8K010 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LINC00473A8K010 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LINC00473A8K010 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
LINC00473A8K010 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.38■□□□□ 0.69
LINC00473A8K010 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00473A8K010 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
LINC00473A8K010 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.37■□□□□ 0.69
LINC00473A8K010 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00473A8K010 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.37■□□□□ 0.69
LINC00473A8K010 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
LINC00473A8K010 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00473A8K010 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.37■□□□□ 0.69
LINC00473A8K010 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.37■□□□□ 0.69
LINC00473A8K010 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
LINC00473A8K010 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LINC00473A8K010 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
LINC00473A8K010 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00473A8K010 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00473A8K010 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00473A8K010 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.36■□□□□ 0.69
LINC00473A8K010 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00473A8K010 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00473A8K010 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
LINC00473A8K010 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00473A8K010 AC022413.1-201ENST00000624602 984 ntBASIC19.35■□□□□ 0.69
LINC00473A8K010 AP003733.4-201ENST00000623785 1697 ntBASIC19.35■□□□□ 0.69
LINC00473A8K010 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00473A8K010 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00473A8K010 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00473A8K010 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00473A8K010 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.34■□□□□ 0.69
LINC00473A8K010 ECEL1P2-201ENST00000461596 1295 ntBASIC19.34■□□□□ 0.69
LINC00473A8K010 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00473A8K010 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00473A8K010 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00473A8K010 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
LINC00473A8K010 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00473A8K010 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LINC00473A8K010 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
LINC00473A8K010 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LINC00473A8K010 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LINC00473A8K010 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.33■□□□□ 0.68
LINC00473A8K010 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms