Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPSF4LA6NMK7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.96■■□□□ 1.11
CPSF4LA6NMK7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPSF4LA6NMK7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPSF4LA6NMK7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.96■■□□□ 1.11
CPSF4LA6NMK7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CPSF4LA6NMK7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPSF4LA6NMK7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPSF4LA6NMK7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CPSF4LA6NMK7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.95■■□□□ 1.1
CPSF4LA6NMK7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.95■■□□□ 1.1
CPSF4LA6NMK7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.95■■□□□ 1.1
CPSF4LA6NMK7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CPSF4LA6NMK7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.94■■□□□ 1.1
CPSF4LA6NMK7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPSF4LA6NMK7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CPSF4LA6NMK7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.94■■□□□ 1.1
CPSF4LA6NMK7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CPSF4LA6NMK7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPSF4LA6NMK7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPSF4LA6NMK7 AC025884.2-201ENST00000553429 711 ntBASIC21.94■■□□□ 1.1
CPSF4LA6NMK7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CPSF4LA6NMK7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
CPSF4LA6NMK7 AC097639.1-201ENST00000565519 1891 ntBASIC21.94■■□□□ 1.1
CPSF4LA6NMK7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPSF4LA6NMK7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.94■■□□□ 1.1
CPSF4LA6NMK7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPSF4LA6NMK7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.94■■□□□ 1.1
CPSF4LA6NMK7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CPSF4LA6NMK7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CPSF4LA6NMK7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CPSF4LA6NMK7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPSF4LA6NMK7 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPSF4LA6NMK7 MIR639-201ENST00000384974 98 ntBASIC21.93■■□□□ 1.1
CPSF4LA6NMK7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.93■■□□□ 1.1
CPSF4LA6NMK7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CPSF4LA6NMK7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF4LA6NMK7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF4LA6NMK7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF4LA6NMK7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF4LA6NMK7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.92■■□□□ 1.1
CPSF4LA6NMK7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF4LA6NMK7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF4LA6NMK7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF4LA6NMK7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.91■■□□□ 1.1
CPSF4LA6NMK7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CPSF4LA6NMK7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CPSF4LA6NMK7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CPSF4LA6NMK7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPSF4LA6NMK7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPSF4LA6NMK7 SMPD5-203ENST00000639008 1464 ntBASIC21.9■■□□□ 1.1
CPSF4LA6NMK7 MIR3960-201ENST00000583311 91 ntBASIC21.9■■□□□ 1.1
CPSF4LA6NMK7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPSF4LA6NMK7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.9■■□□□ 1.1
CPSF4LA6NMK7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPSF4LA6NMK7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPSF4LA6NMK7 AL139125.2-201ENST00000623134 1869 ntBASIC21.89■■□□□ 1.09
CPSF4LA6NMK7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPSF4LA6NMK7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CPSF4LA6NMK7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPSF4LA6NMK7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CPSF4LA6NMK7 AC092296.2-201ENST00000589470 999 ntBASIC21.88■■□□□ 1.09
CPSF4LA6NMK7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPSF4LA6NMK7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPSF4LA6NMK7 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPSF4LA6NMK7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CPSF4LA6NMK7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPSF4LA6NMK7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.87■■□□□ 1.09
CPSF4LA6NMK7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPSF4LA6NMK7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.87■■□□□ 1.09
CPSF4LA6NMK7 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.09
CPSF4LA6NMK7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPSF4LA6NMK7 AC022413.1-201ENST00000624602 984 ntBASIC21.86■■□□□ 1.09
CPSF4LA6NMK7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CPSF4LA6NMK7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CPSF4LA6NMK7 SLC6A10P-202ENST00000431994 2058 ntBASIC21.86■■□□□ 1.09
CPSF4LA6NMK7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPSF4LA6NMK7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.85■■□□□ 1.09
CPSF4LA6NMK7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.85■■□□□ 1.09
CPSF4LA6NMK7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.85■■□□□ 1.09
CPSF4LA6NMK7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPSF4LA6NMK7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.84■■□□□ 1.09
CPSF4LA6NMK7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPSF4LA6NMK7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CPSF4LA6NMK7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPSF4LA6NMK7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CPSF4LA6NMK7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC21.84■■□□□ 1.09
CPSF4LA6NMK7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPSF4LA6NMK7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CPSF4LA6NMK7 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.83■■□□□ 1.09
CPSF4LA6NMK7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPSF4LA6NMK7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPSF4LA6NMK7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.83■■□□□ 1.09
CPSF4LA6NMK7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.83■■□□□ 1.09
CPSF4LA6NMK7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.83■■□□□ 1.09
CPSF4LA6NMK7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.83■■□□□ 1.08
CPSF4LA6NMK7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CPSF4LA6NMK7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
CPSF4LA6NMK7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CPSF4LA6NMK7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms