Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.91■□□□□ 0.62
LINC01548A6NM66 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.91■□□□□ 0.62
LINC01548A6NM66 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01548A6NM66 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
LINC01548A6NM66 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LINC01548A6NM66 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01548A6NM66 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
LINC01548A6NM66 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LINC01548A6NM66 AC139795.1-202ENST00000500444 432 ntBASIC18.9■□□□□ 0.62
LINC01548A6NM66 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.9■□□□□ 0.62
LINC01548A6NM66 AC010980.1-201ENST00000587192 1142 ntBASIC18.9■□□□□ 0.62
LINC01548A6NM66 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
LINC01548A6NM66 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.9■□□□□ 0.62
LINC01548A6NM66 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.9■□□□□ 0.62
LINC01548A6NM66 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01548A6NM66 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.89■□□□□ 0.61
LINC01548A6NM66 AC087393.1-201ENST00000582896 145 ntBASIC18.89■□□□□ 0.61
LINC01548A6NM66 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01548A6NM66 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.89■□□□□ 0.61
LINC01548A6NM66 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01548A6NM66 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01548A6NM66 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LINC01548A6NM66 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
LINC01548A6NM66 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.89■□□□□ 0.61
LINC01548A6NM66 AC145676.1-201ENST00000514988 2004 ntBASIC18.88■□□□□ 0.61
LINC01548A6NM66 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LINC01548A6NM66 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01548A6NM66 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01548A6NM66 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.88■□□□□ 0.61
LINC01548A6NM66 PVT1_1.1-201ENST00000615125 194 ntBASIC18.88■□□□□ 0.61
LINC01548A6NM66 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LINC01548A6NM66 DUSP8P4-201ENST00000399538 1761 ntBASIC18.88■□□□□ 0.61
LINC01548A6NM66 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC01548A6NM66 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LINC01548A6NM66 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC01548A6NM66 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC01548A6NM66 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.87■□□□□ 0.61
LINC01548A6NM66 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LINC01548A6NM66 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.87■□□□□ 0.61
LINC01548A6NM66 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.87■□□□□ 0.61
LINC01548A6NM66 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01548A6NM66 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01548A6NM66 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.86■□□□□ 0.61
LINC01548A6NM66 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.86■□□□□ 0.61
LINC01548A6NM66 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01548A6NM66 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.86■□□□□ 0.61
LINC01548A6NM66 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01548A6NM66 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.86■□□□□ 0.61
LINC01548A6NM66 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LINC01548A6NM66 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01548A6NM66 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01548A6NM66 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01548A6NM66 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01548A6NM66 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.85■□□□□ 0.61
LINC01548A6NM66 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01548A6NM66 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01548A6NM66 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LINC01548A6NM66 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LINC01548A6NM66 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01548A6NM66 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LINC01548A6NM66 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.84■□□□□ 0.61
LINC01548A6NM66 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LINC01548A6NM66 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
LINC01548A6NM66 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.84■□□□□ 0.61
LINC01548A6NM66 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
LINC01548A6NM66 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LINC01548A6NM66 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
LINC01548A6NM66 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LINC01548A6NM66 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
LINC01548A6NM66 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01548A6NM66 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01548A6NM66 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01548A6NM66 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01548A6NM66 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LINC01548A6NM66 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LINC01548A6NM66 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01548A6NM66 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.82■□□□□ 0.6
LINC01548A6NM66 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01548A6NM66 KRT18P10-201ENST00000388836 1287 ntBASIC18.82■□□□□ 0.6
LINC01548A6NM66 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.82■□□□□ 0.6
LINC01548A6NM66 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
LINC01548A6NM66 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
LINC01548A6NM66 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LINC01548A6NM66 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01548A6NM66 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01548A6NM66 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01548A6NM66 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01548A6NM66 LONRF2P2-201ENST00000439212 571 ntBASIC18.81■□□□□ 0.6
LINC01548A6NM66 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.81■□□□□ 0.6
LINC01548A6NM66 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.81■□□□□ 0.6
LINC01548A6NM66 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01548A6NM66 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.81■□□□□ 0.6
LINC01548A6NM66 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.81■□□□□ 0.6
LINC01548A6NM66 KRT8P33-201ENST00000508125 1423 ntBASIC18.81■□□□□ 0.6
LINC01548A6NM66 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01548A6NM66 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01548A6NM66 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01548A6NM66 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LINC01548A6NM66 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.8■□□□□ 0.6
LINC01548A6NM66 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms