Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.38■■□□□ 1.81
TRIM49BA6NDI0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM49BA6NDI0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM49BA6NDI0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM49BA6NDI0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRIM49BA6NDI0 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TRIM49BA6NDI0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
TRIM49BA6NDI0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.36■■□□□ 1.81
TRIM49BA6NDI0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
TRIM49BA6NDI0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM49BA6NDI0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM49BA6NDI0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM49BA6NDI0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM49BA6NDI0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM49BA6NDI0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM49BA6NDI0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM49BA6NDI0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.35■■□□□ 1.81
TRIM49BA6NDI0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.35■■□□□ 1.81
TRIM49BA6NDI0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.35■■□□□ 1.81
TRIM49BA6NDI0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM49BA6NDI0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRIM49BA6NDI0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM49BA6NDI0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM49BA6NDI0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.34■■□□□ 1.81
TRIM49BA6NDI0 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC26.34■■□□□ 1.81
TRIM49BA6NDI0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM49BA6NDI0 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.34■■□□□ 1.81
TRIM49BA6NDI0 SLC6A10P-202ENST00000431994 2058 ntBASIC26.34■■□□□ 1.81
TRIM49BA6NDI0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.33■■□□□ 1.81
TRIM49BA6NDI0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM49BA6NDI0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM49BA6NDI0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM49BA6NDI0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM49BA6NDI0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM49BA6NDI0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM49BA6NDI0 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
TRIM49BA6NDI0 GPX1-201ENST00000419349 1106 ntBASIC26.32■■□□□ 1.8
TRIM49BA6NDI0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM49BA6NDI0 RP9P-202ENST00000450133 1212 ntBASIC26.32■■□□□ 1.8
TRIM49BA6NDI0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM49BA6NDI0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM49BA6NDI0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM49BA6NDI0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TRIM49BA6NDI0 AC093536.1-201ENST00000569153 554 ntBASIC26.31■■□□□ 1.8
TRIM49BA6NDI0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
TRIM49BA6NDI0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
TRIM49BA6NDI0 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM49BA6NDI0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.3■■□□□ 1.8
TRIM49BA6NDI0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM49BA6NDI0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM49BA6NDI0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM49BA6NDI0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM49BA6NDI0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
TRIM49BA6NDI0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM49BA6NDI0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM49BA6NDI0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.29■■□□□ 1.8
TRIM49BA6NDI0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.29■■□□□ 1.8
TRIM49BA6NDI0 AC007029.1-201ENST00000604183 313 ntBASIC26.29■■□□□ 1.8
TRIM49BA6NDI0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.29■■□□□ 1.8
TRIM49BA6NDI0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM49BA6NDI0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM49BA6NDI0 AL139125.2-201ENST00000623134 1869 ntBASIC26.28■■□□□ 1.8
TRIM49BA6NDI0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.28■■□□□ 1.8
TRIM49BA6NDI0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.28■■□□□ 1.8
TRIM49BA6NDI0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.28■■□□□ 1.8
TRIM49BA6NDI0 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM49BA6NDI0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM49BA6NDI0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM49BA6NDI0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC26.27■■□□□ 1.8
TRIM49BA6NDI0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
TRIM49BA6NDI0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.27■■□□□ 1.8
TRIM49BA6NDI0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM49BA6NDI0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.27■■□□□ 1.8
TRIM49BA6NDI0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
TRIM49BA6NDI0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
TRIM49BA6NDI0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.27■■□□□ 1.8
TRIM49BA6NDI0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM49BA6NDI0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM49BA6NDI0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM49BA6NDI0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM49BA6NDI0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.26■■□□□ 1.79
TRIM49BA6NDI0 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM49BA6NDI0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
TRIM49BA6NDI0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
TRIM49BA6NDI0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM49BA6NDI0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.25■■□□□ 1.79
TRIM49BA6NDI0 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM49BA6NDI0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
TRIM49BA6NDI0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
TRIM49BA6NDI0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.24■■□□□ 1.79
TRIM49BA6NDI0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.24■■□□□ 1.79
TRIM49BA6NDI0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.24■■□□□ 1.79
TRIM49BA6NDI0 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM49BA6NDI0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM49BA6NDI0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM49BA6NDI0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM49BA6NDI0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM49BA6NDI0 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM49BA6NDI0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.23■■□□□ 1.79
TRIM49BA6NDI0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms