Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.84■■□□□ 1.09
TRAV17A0A0B4J275 AC120024.1-201ENST00000562672 995 ntBASIC21.84■■□□□ 1.09
TRAV17A0A0B4J275 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.84■■□□□ 1.09
TRAV17A0A0B4J275 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
TRAV17A0A0B4J275 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRAV17A0A0B4J275 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
TRAV17A0A0B4J275 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
TRAV17A0A0B4J275 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRAV17A0A0B4J275 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.83■■□□□ 1.09
TRAV17A0A0B4J275 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.83■■□□□ 1.09
TRAV17A0A0B4J275 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.83■■□□□ 1.09
TRAV17A0A0B4J275 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
TRAV17A0A0B4J275 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.82■■□□□ 1.08
TRAV17A0A0B4J275 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRAV17A0A0B4J275 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.82■■□□□ 1.08
TRAV17A0A0B4J275 AC137630.3-201ENST00000607245 391 ntBASIC21.82■■□□□ 1.08
TRAV17A0A0B4J275 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
TRAV17A0A0B4J275 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
TRAV17A0A0B4J275 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
TRAV17A0A0B4J275 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.81■■□□□ 1.08
TRAV17A0A0B4J275 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV17A0A0B4J275 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV17A0A0B4J275 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.81■■□□□ 1.08
TRAV17A0A0B4J275 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.81■■□□□ 1.08
TRAV17A0A0B4J275 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.81■■□□□ 1.08
TRAV17A0A0B4J275 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.81■■□□□ 1.08
TRAV17A0A0B4J275 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV17A0A0B4J275 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV17A0A0B4J275 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV17A0A0B4J275 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV17A0A0B4J275 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRAV17A0A0B4J275 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.8■■□□□ 1.08
TRAV17A0A0B4J275 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TRAV17A0A0B4J275 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
TRAV17A0A0B4J275 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
TRAV17A0A0B4J275 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
TRAV17A0A0B4J275 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV17A0A0B4J275 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV17A0A0B4J275 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.79■■□□□ 1.08
TRAV17A0A0B4J275 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV17A0A0B4J275 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.79■■□□□ 1.08
TRAV17A0A0B4J275 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV17A0A0B4J275 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV17A0A0B4J275 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.79■■□□□ 1.08
TRAV17A0A0B4J275 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRAV17A0A0B4J275 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAV17A0A0B4J275 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
TRAV17A0A0B4J275 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAV17A0A0B4J275 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.78■■□□□ 1.08
TRAV17A0A0B4J275 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV17A0A0B4J275 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV17A0A0B4J275 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV17A0A0B4J275 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.08
TRAV17A0A0B4J275 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.77■■□□□ 1.08
TRAV17A0A0B4J275 KRT16P3-201ENST00000439127 1283 ntBASIC21.77■■□□□ 1.08
TRAV17A0A0B4J275 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV17A0A0B4J275 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.77■■□□□ 1.07
TRAV17A0A0B4J275 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
TRAV17A0A0B4J275 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
TRAV17A0A0B4J275 AC021242.3-201ENST00000607598 1377 ntBASIC21.76■■□□□ 1.07
TRAV17A0A0B4J275 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV17A0A0B4J275 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV17A0A0B4J275 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.76■■□□□ 1.07
TRAV17A0A0B4J275 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV17A0A0B4J275 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV17A0A0B4J275 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRAV17A0A0B4J275 UNC93B8-201ENST00000511903 705 ntBASIC21.75■■□□□ 1.07
TRAV17A0A0B4J275 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.75■■□□□ 1.07
TRAV17A0A0B4J275 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
TRAV17A0A0B4J275 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.74■■□□□ 1.07
TRAV17A0A0B4J275 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV17A0A0B4J275 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.74■■□□□ 1.07
TRAV17A0A0B4J275 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV17A0A0B4J275 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.74■■□□□ 1.07
TRAV17A0A0B4J275 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.74■■□□□ 1.07
TRAV17A0A0B4J275 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.74■■□□□ 1.07
TRAV17A0A0B4J275 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.74■■□□□ 1.07
TRAV17A0A0B4J275 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.74■■□□□ 1.07
TRAV17A0A0B4J275 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.74■■□□□ 1.07
TRAV17A0A0B4J275 AC008406.3-201ENST00000620001 1374 ntBASIC21.74■■□□□ 1.07
TRAV17A0A0B4J275 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.73■■□□□ 1.07
TRAV17A0A0B4J275 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAV17A0A0B4J275 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
TRAV17A0A0B4J275 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.73■■□□□ 1.07
TRAV17A0A0B4J275 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TRAV17A0A0B4J275 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAV17A0A0B4J275 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.73■■□□□ 1.07
TRAV17A0A0B4J275 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV17A0A0B4J275 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV17A0A0B4J275 TSPY9P-201ENST00000440215 945 ntBASIC21.72■■□□□ 1.07
TRAV17A0A0B4J275 TSPY11P-201ENST00000442607 1045 ntBASIC21.72■■□□□ 1.07
TRAV17A0A0B4J275 MIR4281-201ENST00000580852 62 ntBASIC21.72■■□□□ 1.07
TRAV17A0A0B4J275 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.72■■□□□ 1.07
TRAV17A0A0B4J275 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.71■■□□□ 1.07
TRAV17A0A0B4J275 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRAV17A0A0B4J275 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.71■■□□□ 1.07
TRAV17A0A0B4J275 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.71■■□□□ 1.07
TRAV17A0A0B4J275 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRAV17A0A0B4J275 AC011551.1-201ENST00000614101 683 ntBASIC21.71■■□□□ 1.07
TRAV17A0A0B4J275 AC019069.1-201ENST00000610008 1333 ntBASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms