Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV9-1A0A075B6T8 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV9-1A0A075B6T8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV9-1A0A075B6T8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV9-1A0A075B6T8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV9-1A0A075B6T8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRAV9-1A0A075B6T8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV9-1A0A075B6T8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRAV9-1A0A075B6T8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV9-1A0A075B6T8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAV9-1A0A075B6T8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV9-1A0A075B6T8 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRAV9-1A0A075B6T8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
TRAV9-1A0A075B6T8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV9-1A0A075B6T8 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TRAV9-1A0A075B6T8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV9-1A0A075B6T8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV9-1A0A075B6T8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV9-1A0A075B6T8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAV9-1A0A075B6T8 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV9-1A0A075B6T8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRAV9-1A0A075B6T8 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV9-1A0A075B6T8 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV9-1A0A075B6T8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
TRAV9-1A0A075B6T8 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV9-1A0A075B6T8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV9-1A0A075B6T8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV9-1A0A075B6T8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV9-1A0A075B6T8 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV9-1A0A075B6T8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
TRAV9-1A0A075B6T8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV9-1A0A075B6T8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TRAV9-1A0A075B6T8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV9-1A0A075B6T8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAV9-1A0A075B6T8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV9-1A0A075B6T8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV9-1A0A075B6T8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
TRAV9-1A0A075B6T8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.94■□□□□ 0.46
TRAV9-1A0A075B6T8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV9-1A0A075B6T8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV9-1A0A075B6T8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV9-1A0A075B6T8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV9-1A0A075B6T8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.93■□□□□ 0.46
TRAV9-1A0A075B6T8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TRAV9-1A0A075B6T8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV9-1A0A075B6T8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
TRAV9-1A0A075B6T8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV9-1A0A075B6T8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV9-1A0A075B6T8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV9-1A0A075B6T8 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.92■□□□□ 0.46
TRAV9-1A0A075B6T8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV9-1A0A075B6T8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV9-1A0A075B6T8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV9-1A0A075B6T8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV9-1A0A075B6T8 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV9-1A0A075B6T8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAV9-1A0A075B6T8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV9-1A0A075B6T8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV9-1A0A075B6T8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV9-1A0A075B6T8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV9-1A0A075B6T8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRAV9-1A0A075B6T8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV9-1A0A075B6T8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV9-1A0A075B6T8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV9-1A0A075B6T8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV9-1A0A075B6T8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV9-1A0A075B6T8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV9-1A0A075B6T8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV9-1A0A075B6T8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV9-1A0A075B6T8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRAV9-1A0A075B6T8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TRAV9-1A0A075B6T8 LINC00565-201ENST00000562710 2331 ntBASIC17.88■□□□□ 0.45
TRAV9-1A0A075B6T8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV9-1A0A075B6T8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TRAV9-1A0A075B6T8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV9-1A0A075B6T8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV9-1A0A075B6T8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV9-1A0A075B6T8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV9-1A0A075B6T8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC17.87■□□□□ 0.45
TRAV9-1A0A075B6T8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV9-1A0A075B6T8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV9-1A0A075B6T8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV9-1A0A075B6T8 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV9-1A0A075B6T8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV9-1A0A075B6T8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV9-1A0A075B6T8 ZNRF2P1-201ENST00000441407 443 ntBASIC17.86■□□□□ 0.45
TRAV9-1A0A075B6T8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV9-1A0A075B6T8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRAV9-1A0A075B6T8 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV9-1A0A075B6T8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV9-1A0A075B6T8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TRAV9-1A0A075B6T8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV9-1A0A075B6T8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV9-1A0A075B6T8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAV9-1A0A075B6T8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV9-1A0A075B6T8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC17.85■□□□□ 0.45
TRAV9-1A0A075B6T8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
TRAV9-1A0A075B6T8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV9-1A0A075B6T8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRAV9-1A0A075B6T8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms