Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.04■□□□□ 0.32
TRBV25-1A0A075B6N4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
TRBV25-1A0A075B6N4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV25-1A0A075B6N4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV25-1A0A075B6N4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV25-1A0A075B6N4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV25-1A0A075B6N4 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV25-1A0A075B6N4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.03■□□□□ 0.32
TRBV25-1A0A075B6N4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
TRBV25-1A0A075B6N4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRBV25-1A0A075B6N4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV25-1A0A075B6N4 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV25-1A0A075B6N4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV25-1A0A075B6N4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV25-1A0A075B6N4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV25-1A0A075B6N4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV25-1A0A075B6N4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRBV25-1A0A075B6N4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRBV25-1A0A075B6N4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
TRBV25-1A0A075B6N4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV25-1A0A075B6N4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
TRBV25-1A0A075B6N4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV25-1A0A075B6N4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV25-1A0A075B6N4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV25-1A0A075B6N4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.02■□□□□ 0.32
TRBV25-1A0A075B6N4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.02■□□□□ 0.32
TRBV25-1A0A075B6N4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.02■□□□□ 0.32
TRBV25-1A0A075B6N4 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV25-1A0A075B6N4 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
TRBV25-1A0A075B6N4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV25-1A0A075B6N4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.02■□□□□ 0.31
TRBV25-1A0A075B6N4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV25-1A0A075B6N4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV25-1A0A075B6N4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV25-1A0A075B6N4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV25-1A0A075B6N4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV25-1A0A075B6N4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV25-1A0A075B6N4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV25-1A0A075B6N4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.01■□□□□ 0.31
TRBV25-1A0A075B6N4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV25-1A0A075B6N4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV25-1A0A075B6N4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRBV25-1A0A075B6N4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.01■□□□□ 0.31
TRBV25-1A0A075B6N4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17■□□□□ 0.31
TRBV25-1A0A075B6N4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TRBV25-1A0A075B6N4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV25-1A0A075B6N4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV25-1A0A075B6N4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17■□□□□ 0.31
TRBV25-1A0A075B6N4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV25-1A0A075B6N4 DUX4L11-201ENST00000611504 1267 ntBASIC17■□□□□ 0.31
TRBV25-1A0A075B6N4 DUX4L12-201ENST00000614593 1267 ntBASIC17■□□□□ 0.31
TRBV25-1A0A075B6N4 DUX4L14-201ENST00000621227 1267 ntBASIC17■□□□□ 0.31
TRBV25-1A0A075B6N4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV25-1A0A075B6N4 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV25-1A0A075B6N4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV25-1A0A075B6N4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRBV25-1A0A075B6N4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TRBV25-1A0A075B6N4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV25-1A0A075B6N4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV25-1A0A075B6N4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV25-1A0A075B6N4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
TRBV25-1A0A075B6N4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV25-1A0A075B6N4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV25-1A0A075B6N4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
TRBV25-1A0A075B6N4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV25-1A0A075B6N4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV25-1A0A075B6N4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC16.99■□□□□ 0.31
TRBV25-1A0A075B6N4 AC148477.6-201ENST00000623746 465 ntBASIC16.99■□□□□ 0.31
TRBV25-1A0A075B6N4 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV25-1A0A075B6N4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV25-1A0A075B6N4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRBV25-1A0A075B6N4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV25-1A0A075B6N4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC16.99■□□□□ 0.31
TRBV25-1A0A075B6N4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV25-1A0A075B6N4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC16.99■□□□□ 0.31
TRBV25-1A0A075B6N4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TRBV25-1A0A075B6N4 MIR219A2-201ENST00000608502 1504 ntBASIC16.98■□□□□ 0.31
TRBV25-1A0A075B6N4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV25-1A0A075B6N4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV25-1A0A075B6N4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV25-1A0A075B6N4 AC138932.3-201ENST00000567634 1902 ntBASIC16.98■□□□□ 0.31
TRBV25-1A0A075B6N4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV25-1A0A075B6N4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV25-1A0A075B6N4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV25-1A0A075B6N4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
TRBV25-1A0A075B6N4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV25-1A0A075B6N4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
TRBV25-1A0A075B6N4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV25-1A0A075B6N4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC16.97■□□□□ 0.31
TRBV25-1A0A075B6N4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV25-1A0A075B6N4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV25-1A0A075B6N4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRBV25-1A0A075B6N4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV25-1A0A075B6N4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV25-1A0A075B6N4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV25-1A0A075B6N4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRBV25-1A0A075B6N4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV25-1A0A075B6N4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV25-1A0A075B6N4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV25-1A0A075B6N4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms