Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 AL139010.1-201ENST00000454878 894 ntBASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 PAM16-204ENST00000571941 674 ntTSL 3 BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 AC015936.2-201ENST00000593177 259 ntBASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 REXO1L6P-201ENST00000603433 1515 ntBASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 FADS2-205ENST00000517839 469 ntTSL 3 BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 AC092552.1-201ENST00000547243 906 ntBASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 MIR4321-201ENST00000592276 80 ntBASIC24.78■■□□□ 1.56
CDC42BPBQ9Y5S2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CDC42BPBQ9Y5S2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC24.77■■□□□ 1.56
CDC42BPBQ9Y5S2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC24.77■■□□□ 1.56
CDC42BPBQ9Y5S2 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CDC42BPBQ9Y5S2 NOC2LP2-201ENST00000407594 1944 ntBASIC24.77■■□□□ 1.56
CDC42BPBQ9Y5S2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC24.77■■□□□ 1.56
CDC42BPBQ9Y5S2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
CDC42BPBQ9Y5S2 AC018665.1-201ENST00000622927 1362 ntBASIC24.77■■□□□ 1.56
CDC42BPBQ9Y5S2 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC24.77■■□□□ 1.56
CDC42BPBQ9Y5S2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CDC42BPBQ9Y5S2 Z97205.2-201ENST00000564697 1639 ntBASIC24.77■■□□□ 1.56
CDC42BPBQ9Y5S2 AZGP1P1-201ENST00000411909 902 ntBASIC24.77■■□□□ 1.56
CDC42BPBQ9Y5S2 AP002490.2-201ENST00000524791 560 ntBASIC24.77■■□□□ 1.56
CDC42BPBQ9Y5S2 NEU3-203ENST00000529024 581 ntTSL 3 BASIC24.77■■□□□ 1.56
CDC42BPBQ9Y5S2 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC24.77■■□□□ 1.56
CDC42BPBQ9Y5S2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC24.77■■□□□ 1.56
CDC42BPBQ9Y5S2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CDC42BPBQ9Y5S2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
CDC42BPBQ9Y5S2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CDC42BPBQ9Y5S2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
CDC42BPBQ9Y5S2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CDC42BPBQ9Y5S2 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CDC42BPBQ9Y5S2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 AC060834.1-201ENST00000443027 2032 ntBASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 MFF-223ENST00000524634 647 ntTSL 2 BASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 NEFHP1-201ENST00000412845 2629 ntBASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CDC42BPBQ9Y5S2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 MEP1AP4-201ENST00000423244 1087 ntBASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 CDC14C-201ENST00000428251 1719 ntBASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 MIR5189-201ENST00000577370 114 ntBASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC24.75■■□□□ 1.55
CDC42BPBQ9Y5S2 RARRES2P5-201ENST00000564013 466 ntBASIC24.75■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms