Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 KRT18P67-201ENST00000432816 1264 ntBASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 AC018712.1-201ENST00000455767 687 ntBASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 AC105339.3-201ENST00000560043 636 ntBASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 TP73-AS1-207ENST00000624167 988 ntBASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 AC007950.2-201ENST00000615045 2347 ntBASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA11Q9Y5H2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 AL450487.1-201ENST00000426799 995 ntBASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 REXO1L3P-201ENST00000622202 1288 ntBASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 AC006538.1-201ENST00000567905 1585 ntBASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA11Q9Y5H2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PCDHGA11Q9Y5H2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms