Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC073912.3-201ENST00000624414 853 ntBASIC15.86■□□□□ 0.13
AP4S1Q9Y587 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 GGT3P-204ENST00000453783 1664 ntBASIC15.86■□□□□ 0.13
AP4S1Q9Y587 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
AP4S1Q9Y587 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 FAM8A6P-201ENST00000407496 1135 ntBASIC15.85■□□□□ 0.13
AP4S1Q9Y587 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 ZNF444P1-201ENST00000559497 298 ntBASIC15.85■□□□□ 0.13
AP4S1Q9Y587 MIR4785-201ENST00000585005 73 ntBASIC15.85■□□□□ 0.13
AP4S1Q9Y587 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
AP4S1Q9Y587 CYP2D8P-201ENST00000433633 1490 ntBASIC15.84■□□□□ 0.13
AP4S1Q9Y587 AL353593.2-201ENST00000602529 1483 ntBASIC15.84■□□□□ 0.13
AP4S1Q9Y587 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 CD99P1-205ENST00000527459 561 ntBASIC15.84■□□□□ 0.13
AP4S1Q9Y587 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 ITM2C-210ENST00000620962 501 ntBASIC15.84■□□□□ 0.13
AP4S1Q9Y587 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
AP4S1Q9Y587 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms