Protein–RNA interactions for Protein: Q9Y4C2

TCAF1, TRPM8 channel-associated factor 1, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1Q9Y4C2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TCAF1Q9Y4C2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCAF1Q9Y4C2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCAF1Q9Y4C2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCAF1Q9Y4C2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCAF1Q9Y4C2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCAF1Q9Y4C2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TCAF1Q9Y4C2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCAF1Q9Y4C2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
TCAF1Q9Y4C2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCAF1Q9Y4C2 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCAF1Q9Y4C2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
TCAF1Q9Y4C2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCAF1Q9Y4C2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.79■□□□□ 0.28
TCAF1Q9Y4C2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.79■□□□□ 0.28
TCAF1Q9Y4C2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
TCAF1Q9Y4C2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCAF1Q9Y4C2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TCAF1Q9Y4C2 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TCAF1Q9Y4C2 CROCCP1-201ENST00000426910 5675 ntBASIC16.79■□□□□ 0.28
TCAF1Q9Y4C2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 AP001005.1-201ENST00000571755 1248 ntBASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 SLC25A6P4-201ENST00000586535 553 ntBASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
TCAF1Q9Y4C2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 GPAA1P2-202ENST00000606848 1787 ntBASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 AC093909.1-201ENST00000504731 1122 ntBASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
TCAF1Q9Y4C2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TCAF1Q9Y4C2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TCAF1Q9Y4C2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TCAF1Q9Y4C2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TCAF1Q9Y4C2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TCAF1Q9Y4C2 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
TCAF1Q9Y4C2 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.77■□□□□ 0.27
TCAF1Q9Y4C2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TCAF1Q9Y4C2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms