Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 CYP2D8P-201ENST00000433633 1490 ntBASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRCH1Q9Y2L9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 CCR12P-201ENST00000446203 998 ntBASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.94■□□□□ 0.14
LRCH1Q9Y2L9 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 SLC25A1P2-201ENST00000430693 912 ntBASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 FRMD8P1-201ENST00000440433 1524 ntBASIC15.93■□□□□ 0.14
LRCH1Q9Y2L9 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms