Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC22.67■■□□□ 1.22
NINLQ9Y2I6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NINLQ9Y2I6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NINLQ9Y2I6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NINLQ9Y2I6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
NINLQ9Y2I6 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NINLQ9Y2I6 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 HLA-V-204ENST00000476601 1289 ntBASIC22.66■■□□□ 1.22
NINLQ9Y2I6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 INGX-202ENST00000489074 768 ntBASIC22.66■■□□□ 1.22
NINLQ9Y2I6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 BANF1P1-201ENST00000553684 263 ntBASIC22.66■■□□□ 1.22
NINLQ9Y2I6 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 AC073592.8-201ENST00000624126 511 ntBASIC22.66■■□□□ 1.22
NINLQ9Y2I6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 AL603756.1-201ENST00000606511 2163 ntBASIC22.66■■□□□ 1.22
NINLQ9Y2I6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NINLQ9Y2I6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC22.65■■□□□ 1.22
NINLQ9Y2I6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
NINLQ9Y2I6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
NINLQ9Y2I6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC22.64■■□□□ 1.22
NINLQ9Y2I6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC22.64■■□□□ 1.22
NINLQ9Y2I6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC22.64■■□□□ 1.22
NINLQ9Y2I6 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC22.64■■□□□ 1.22
NINLQ9Y2I6 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC22.64■■□□□ 1.22
NINLQ9Y2I6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
NINLQ9Y2I6 AC097493.3-201ENST00000509725 367 ntBASIC22.64■■□□□ 1.22
NINLQ9Y2I6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC22.64■■□□□ 1.22
NINLQ9Y2I6 AL390754.1-201ENST00000619088 582 ntBASIC22.64■■□□□ 1.22
NINLQ9Y2I6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC22.64■■□□□ 1.22
NINLQ9Y2I6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC22.64■■□□□ 1.22
NINLQ9Y2I6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
NINLQ9Y2I6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
NINLQ9Y2I6 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC22.64■■□□□ 1.22
NINLQ9Y2I6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
NINLQ9Y2I6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
NINLQ9Y2I6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NINLQ9Y2I6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC22.64■■□□□ 1.21
NINLQ9Y2I6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
NINLQ9Y2I6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NINLQ9Y2I6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NINLQ9Y2I6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
NINLQ9Y2I6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC22.64■■□□□ 1.21
NINLQ9Y2I6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NINLQ9Y2I6 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
NINLQ9Y2I6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms